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Job DescriptionP76261
Confidence84.32%DateThu Jan 5 12:21:20 GMT 2012
Rank61Aligned Residues151
% Identity9%Templatec2pz0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase (gdpd)2 from t. tengcongensis
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   341........350.........360.........370.........380.........390.........400.........410.........420
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Query Sequence  IRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG
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Template Sequence  LYEVFELIGDKDFLVNIEIKSGIVLYPGIEEKLIKAIKEYNFEERVII. . . . . SSFNHYSLRDVKKM. APHLKIGLLYQC
Template Known Secondary structure  TTS



SSS

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   102.......110.........120.........130.........140......... 150.........160... ......170.....
 
   421........430.........440.........450.........460.........470.........480.........490.........500
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Query Sequence  TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ
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Template Sequence  GLVEPWHMALRMEAYSLHPFYFNIIP. . . . . . . . . . . . ELVEGCKKNGVKLFPWTVDRKEDMERMIKAGVDGIITDD. . .
Template Known Secondary structure 

SSTTT
SBGGG

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   176...180.........190.........200. ........210.........220.........230.........240
 
   501........510.....
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Query Sequence  PMPLRDFPKWLAGSQ
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Template Sequence  . . . PETLINLVRKGG
Template Known Secondary structure  ...TTT
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   241........250..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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