 |
Job Description | P76261 | Confidence | 41.70% | Date | Thu Jan 5 12:21:20 GMT 2012 |
Rank | 268 | Aligned Residues | 60 |
% Identity | 15% | Template | c1uokA_ |
PDB info |
PDB header:glucosidase | Chain: A: PDB Molecule:oligo-1,6-glucosidase; |
PDBTitle: crystal structure of b. cereus oligo-1,6-glucosidase
|
Resolution | 2.00 Å |
|
 |
  |   |
404 | . | . | . | . | . | 410 | . | . | . | . | . | |
|
|
|
. | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | R | E | L | H | R | K | N | V | K | L | A | . |
. |
. |
. |
I | D | D | F | G | T | G | N | S | S | F | S | W | L | E | T | L | R | P | D | V | L | K | I | D | K | S | F | T | A | A | I | G | S | D | A | V | N | S | T | V | T | D | I | I | I | A | L | G | Q | R | L | N | I | E | L | V | A | E | G | V |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |
|
| . | . | . | . |
|
|
|
|
|   |
|   |
|   |
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |
| . | . | . | . | . |
|   |   |   |
|   |   |   |
|
|   |   |   | . | . | . | . | . | . | . | . |
|
|   |   |
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |
|
|
|
|   |
|
Template Sequence |   |
L | D | Y | L | K | E | L | G | I | D | V | I | W | L | S | P | V | Y | E | S | P | N | D | D | N | G | . |
. |
. |
. |
. |
Y | D | I | S | D | Y | C | K | I | M | N | E | F | . |
. |
. |
. |
. |
. |
. |
. |
G | T | M | E | D | W | D | E | L | L | H | E | M | H | E | R | N | M | K | L | M | M | D | L | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
|
|  |  |
|
|
| T | T | T | T | . | . | . | . | . | S | S |
| S |  |  |  |  |  |
| G | G | G | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|