Return to main results Retrieve Phyre Job Id

Job DescriptionP76261
Confidence78.14%DateThu Jan 5 12:21:20 GMT 2012
Rank94Aligned Residues65
% Identity17%Templatec1cygA_
PDB info PDB header:glycosyltransferaseChain: A: PDB Molecule:cyclodextrin glucanotransferase; PDBTitle: cyclodextrin glucanotransferase (e.c.2.4.1.19) (cgtase)
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   412.......420....... ..430.........440....
Predicted Secondary structure 









...............................



................
Query SS confidence 















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
















. . . . . . . . . . . . . . . .
Query Sequence  VKLAIDDFGTGNSSFS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WLETLRPDVLKIDKSFT. . . . . . . . . . . . . . . .
Query Conservation    






 
 
 
 ............................... 
  
  
 



  

................
Alig confidence 















...............................
















................
Template Conservation 
 
  


  
                      


  

  


 


  


  
 
 
                   
Template Sequence  YQIVVDRFVDGNTSNNPSGALFSSGCTNLRKYCGGDWQGIINKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYH
Template Known Secondary structure 
GGGT

S
GGG


GGGB
GGG
STTSB



TSTTTTTT









SSSS


STT
Template Predicted Secondary structure 






















































Template SS confidence 















































































   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   445....450.........460.........470......
Predicted Secondary structure  .......









Query SS confidence  . . . . . . .































Query Sequence  . . . . . . . AAIGSDAVNSTVTDIIIALGQRLNIELVAEGV
Query Conservation  .......  
            
   
  
 
 





Alig confidence  .......































Template Conservation 

   
   

   

  


 

  

  

 



 
Template Sequence  GYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFA
Template Known Secondary structure  S
S
TTT

TT

Template Predicted Secondary structure 


















Template SS confidence 






































   95....100.........110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions