Return to main results Retrieve Phyre Job Id

Job DescriptionP06996
Confidence100.00%DateThu Jan 5 10:59:51 GMT 2012
Rank1Aligned Residues341
% Identity78%Templated1osma_
SCOP infoTransmembrane beta-barrels Porins Porin
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80...... ...90.........100
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Query Sequence  AEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSA. ENENNSWTRVAFAG
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Template Sequence  AEIYNKDGNKLDLYGKIDGLHYFSDDKDVDGDQTYMRLGVKGETQINDQLTGYGQWEYNVQANNTESSSDQAWTRLAFAG
Template Known Secondary structure 
TTSSTTT



SSS

SS
TT



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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   101........110.........120.........130.........140.........150.........160.........170.........180
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Query Sequence  LKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGNPSGE
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Template Sequence  LKFGDAGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFLQSRANGVATYRNSDFFGLVDGLNFALQYQGKNGSVSGE
Template Known Secondary structure 
TTS

TTGGG


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SS
TTSTTSSSSGGGSSTT

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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   181........190.........200.........210.........220.........230.........240.........250.........260
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Query Sequence  GFTSGVTNNGRDALRQNGDGVGGSITYDYEGFGIGGAISSSKRTDAQNTAAYIGNGDRAETYTGGLKYDANNIYLAAQYT
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Template Sequence  GA. . . . TNNGRGALKQNGDGFGTSVTYDIFDGISAGFAYANSKRTDDQNQLLLGEGDHAETYTGGLKYDANNIYLATQYT
Template Known Secondary structure  T
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GGG
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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