Job Description P06996 Confidence 97.89% Date Thu Jan 5 10:59:51 GMT 2012 Rank 28 Aligned Residues 187 % Identity 16% Template c3brzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:todx; PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx Resolution 3.20 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.																			.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																						.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	N	P	S	G	E	G	F	T	S	G	V	T	N	N	G	R	D	A	L	R	Q	N	G	D	G	V	G	G	S	I	T	Y	D	Y	E	.	G	F	G	I	G	G	A	I	S	S	S	K	R	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	N	T	A	A	Y	I	G	N
Query Conservation																																						.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	F	V	G	T	G	G	A	A	H	F	S	L	S	A	G	G	A	V	D	A	V	G	W	G	G	R	L	G	L	T	Y	K	L	T	D	N	T	V	L	G	A	M	Y	N	F	K	T	S	V	G	D	L	E	G	K	A	T	L	S	A	I	S	G	D	G	A	V	L	P	L	D	G	D	I	R	V	K	N
Template Known Secondary structure		T	T	T	S	G	G	G												T	T																S	S	S											B																T	T	S
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		236	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.																	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	R	A	E	T	Y	T	G	G	L	K	Y	D	.	A	N	N	I	Y	L	A	A	Q	Y	T	Q	T	Y	N	A	T	R	V	G	S	L	G	W	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	A	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	L	A	Y
Query Conservation																.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	M	P	A	S	L	T	L	G	L	A	H	Q	F	N	E	R	W	V	V	A	A	D	I	K	R	A	Y	W	G	D	V	M	D	S	M	N	V	A	F	I	S	Q	L	G	G	I	D	V	A	L	P	H	R	Y	Q	D	I	T	V	A	S	I	G	T	A	Y	K	Y	N	N	D	L	T	L	R	A	G	Y
Template Known Secondary structure				B												S	S	S	S													T	T			S									S	S																									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	S	K	G	K	N	L	G	R	G	Y	D	D	E	D	I	L	K	Y	V	D	V	G	A	T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	K	I	N	L	L	D	D	N	Q	F	T	R	D	A	G	I	N	T	D	N	I	V	A	L	G	L	V	Y	Q	F
Query Conservation
Alig confidence								.	.	.																																							.	.	.
Template Conservation								.	.	.																																							.	.	.
Template Sequence		S	Y	A	Q	L	I	.	.	.	L	P	V	I	P	A	Y	L	K	R	H	V	T	F	G	G	E	Y	D	F	D	K	D	S	R	I	N	L	A	I	S	F	G	L	R	E	R	V	.	.	.	M	L	R	Q	S	H	S	Q	I	N	A	V	V	S	Y	S	K	N	F
Template Known Secondary structure								.	.	.		T	T	S					S											S	S	S	S																.	.	.								B
Template Predicted Secondary structure								.	.	.																																							.	.	.
Template SS confidence
		355	.	.	.	.	360				.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.				.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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