Job Description P06996 Confidence 90.05% Date Thu Jan 5 10:59:51 GMT 2012 Rank 38 Aligned Residues 156 % Identity 11% Template c3aehB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp Resolution 2.00 Å

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		197	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.												.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure														.																																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.																																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	D	G	V	G	G	S	I	T	Y	D	.	Y	E	G	F	G	I	G	G	A	I	S	S	S	K	R	T	D	A	Q	N	T	A	A	Y	I	G	N	G	D	R	A	E	T	Y	T	G	G	L	K	Y	D	A	N	N	I	.	.	.	.	.	.	.	.	.	.	.	Y	L	A	A	Q	Y	T	Q	T	Y	N
Query Conservation														.																																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	W	G	G	G	F	Y	A	S	G	L	F	R	S	G	A	Y	F	D	V	I	A	K	Y	I	H	N	E	N	K	Y	D	L	N	F	A	G	A	G	K	Q	N	F	R	S	H	S	L	Y	A	G	A	E	V	G	Y	R	Y	H	L	T	D	T	T	F	V	E	P	Q	A	E	L	V	W	G	R	L	Q	G
Template Known Secondary structure															T	T	S																			S	S	T	T																									T	T
Template Predicted Secondary structure
Template SS confidence
		1178	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		A	T	R	V	G	S	L	G	W	A	N	K	A	Q	N	F	E	A	V	A	Q	Y	Q	F	D	.	F	G	L	R	P	S	L	A	Y	L	Q	S	K	G	K	N	L	G	R	G	Y	D	D	E	D	I	L	K	Y	V	D	V	G	A	T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	K	I	N	L	L	D
Query Conservation																											.
Alig confidence			.	.	.	.	.																				.																								.	.
Template Conservation			.	.	.	.	.																																												.	.
Template Sequence		Q	.	.	.	.	.	N	S	V	N	P	L	V	G	R	T	G	V	V	S	G	K	T	F	S	G	K	D	W	S	L	T	A	R	A	G	L	H	Y	E	F	D	L	T	D	S	R	K	D	.	.	S	R	M	L	Y	G	V	G	L	N	A	R	F	G	D	N	T	R	L	G	L	E	V	E	R	S	A	F	G
Template Known Secondary structure			.	.	.	.	.																					S	S																S						.	.														T	T	T												S
Template Predicted Secondary structure			.	.	.	.	.																																												.	.
Template SS confidence
		1258						.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.			.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	Q	F	T	R	D	A	G	I	N	T	D	N	I	V	A	L	G	L	V	Y	Q	F
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.
Template Sequence		K	.	.	.	.	.	.	.	.	Y	N	T	D	D	A	I	N	A	N	I	R	Y	S	F
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.
Template SS confidence
		1362									.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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