Job Description P06996 Confidence 97.90% Date Thu Jan 5 10:59:51 GMT 2012 Rank 27 Aligned Residues 161 % Identity 12% Template c2x27X_ PDB info PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein oprg; PDBTitle: crystal structure of the outer membrane protein oprg from2 pseudomonas aeruginosa Resolution 2.40 Å

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		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230									.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.																						.
Query SS confidence																										.	.	.	.	.	.	.	.																						.
Query Sequence		Y	D	Y	E	G	F	G	I	G	G	A	I	S	S	S	K	R	T	D	A	Q	N	T	A	.	.	.	.	.	.	.	.	A	Y	I	G	N	G	D	R	A	E	T	Y	T	G	G	L	K	Y	D	A	N	.	N	I	Y	L	A	A	Q	Y	T	Q	T	Y	N	A	T	R	V	G	S	L	G	W	A	N	K	A
Query Conservation																										.	.	.	.	.	.	.	.																						.
Alig confidence																										.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		H	K	A	G	D	F	I	I	R	G	G	F	A	T	V	D	P	D	D	S	S	S	D	I	K	L	D	G	A	K	Q	R	G	T	K	A	T	V	D	S	D	T	Q	L	G	L	T	F	T	Y	M	F	A	D	K	W	G	V	E	L	V	A	A	T	P	F	N	H	Q	V	D	V	K	G	L	L	D	G	K	L
Template Known Secondary structure				T	T																							T	T				T	T																			S	S	S	S									S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		278	.	280	.	.	.														.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310										.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	F	E	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	Y	Q	F	D	F	G	L	R	P	S	L	A	Y	L	Q	S	K	G	K	N	L	G	R	G	Y	.	.	.	.	.	.	.	.	.	D	D	E	D	I	L	K	Y	V	D	V	G	A	T	Y	Y	F	N	K	N	M	S	T	Y	V
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	I	K	Q	L	P	P	T	L	L	L	Q	Y	Y	P	M	G	G	T	N	S	A	F	Q	P	Y	G	G	L	G	V	N	Y	T	T	F	F	D	E	D	L	A	S	N	R	K	A	Q	G	F	S	S	M	K	L	Q	D	S	W	G	L	A	G	E	L	G	F	D	Y	M	L	N	E	H	A	L	F	N	M
Template Known Secondary structure																	T	T	T	T	S			S																										T	T																						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.												.	360	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	K	I	N	L	L	D	D	N	Q	F	T	R	D	A	G	I	N	T	D	N	I	.	.	.	.	.	.	.	.	.	.	.	V	A	L	G	L	V	Y	Q	F
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	W	Y	M	D	I	D	T	K	A	S	I	N	G	P	S	A	L	G	V	N	K	T	K	V	D	V	D	V	D	P	W	V	Y	M	I	G	F	G	Y	K	F
Template Known Secondary structure																		T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions