Job Description P06996 Confidence 18.14% Date Thu Jan 5 10:59:51 GMT 2012 Rank 54 Aligned Residues 91 % Identity 14% Template c2k4tA_ PDB info PDB header:membrane protein,apoptosis Chain: A: PDB Molecule:voltage-dependent anion-selective channel PDBTitle: solution structure of human vdac-1 in ldao micelles Resolution UNK

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	T	G	G	L	K	Y	D	A	N	N	I	Y	L	A	A	Q	Y	T	Q	T	Y	N	A	T	R	V	G	S	L	G	W	A	N	K	A	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	L	A	Y	L	Q	S	K	G	K	N	L	G	R	G	Y	D	D	E	D	I	L	K	Y	V	D
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.																		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.																		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	R	G	A	L	V	L	G	Y	E	G	W	L	A	G	Y	Q	M	N	F	.	.	.	.	.	.	.	.	.	E	T	A	K	S	R	V	T	Q	S	N	F	A	V	G	Y	K	.	T	D	E	F	Q	L	H	T	N	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	T	E	F	G
Template Known Secondary structure												T	T										.	.	.	.	.	.	.	.	.		T	T	T	T	S												.		S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.										.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.																.	.	.	.	190	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	A	T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	K	I	N	L	L	D	D	N	Q	F	T	R	D	A	G	I	N	T	D	N	I	V	A	L	G	L	V	Y	Q	F
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	I	Y	Q	K	V	N	K	K	L	E	T	A	V	N	L	A	W	T	A	G	N	S	N	.	.	.	.	.	.	.	.	.	.	.	T	R	F	G	I	A	A	K	Y	Q	I
Template Known Secondary structure									S	T	T											T	T	S	S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.												.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions