Job Description P06996 Confidence 98.49% Date Thu Jan 5 10:59:51 GMT 2012 Rank 18 Aligned Residues 159 % Identity 18% Template c2k0lA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles. Resolution UNK

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																															.	.	.	.	.																	.											.
Query SS confidence																															.	.	.	.	.																	.											.
Query Sequence		D	Y	E	G	F	G	I	G	G	A	I	S	S	S	K	R	T	D	A	Q	N	T	A	A	Y	I	G	N	G	.	.	.	.	.	D	R	A	E	T	Y	T	G	G	L	K	Y	D	A	N	N	.	I	Y	L	A	A	Q	Y	T	Q	T	.	Y	N	A	T	R	V	G	S	L	G	W	A	N	K	A	Q	N	F
Query Conservation																															.	.	.	.	.																	.											.
Alig confidence																															.	.	.	.	.																	.											.
Template Conservation
Template Sequence		K	D	N	T	W	Y	A	G	G	K	L	G	W	S	Q	Y	H	D	T	G	F	Y	G	N	G	F	Q	N	N	N	G	P	T	R	N	D	Q	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	L	G	F	E	M	G	Y	D	W	L	G	R	M	A	Y	K	G	S	V	D	N	G	A	F	K	A	Q	G	V
Template Known Secondary structure															S					S						S				S				S																	T	T																		S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		281	.	.	.	.	.	.	.							.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.							.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.																		.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.																		.	.	.	.	.	.
Query Sequence		E	A	V	A	Q	Y	Q	F	.	.	.	.	.	.	D	F	G	L	R	P	S	L	A	Y	L	Q	S	K	G	K	N	.	.	.	.	.	.	L	G	R	G	Y	D	D	E	D	I	L	K	Y	V	D	V	G	A	T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	K	I	N	L	L	D	D	N	Q	F	T
Query Conservation										.	.	.	.	.	.																		.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	S	K	G	N	Y	A	S	T	G	V	S	R	S	E	H	D	T	G	V	S	P	V	F	A	G	G	V	E	W	A	V	T	R	D	I	A	T	R	L	E	Y	Q	W	V	N	N	I	G	D	A	G	T
Template Known Secondary structure											S	S	S	S																			S				S	S	S																						S	S	S								S	S		S	S					S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	A	G	I	N	T	D	N	I	V	A	L	G	L	V	Y	Q	F
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		V	G	T	R	P	.	D	N	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure					S	S	.		S
Template Predicted Secondary structure							.
Template SS confidence
		175	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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