 |
Job Description | P0ADE6 | Confidence | 3.80% | Date | Wed Jan 25 15:20:27 GMT 2012 |
Rank | 80 | Aligned Residues | 33 |
% Identity | 24% | Template | c2l0kA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:stage iii sporulation protein d; |
PDBTitle: nmr solution structure of a transcription factor spoiiid in complex2 with dna
|
Resolution | UNK |
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 130 | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . | . |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | T | V | K | S | G | D | T | L | S | A | I | S | K | Q | V | Y | G | N | A | N | L | Y | N | K | . |
. |
. |
. |
. |
I | F | E | A | N | K | P | M |
Query Conservation |   |
|
|
|
|   |
|
|
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |
|
|
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|
Template Sequence |   |
Y | I | V | E | T | K | K | T | V | R | V | I | A | K | E | F | G | V | S | K | S | T | V | H | K | D | L | T | E | R | L | P | E | I | N | P | D | L |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|