Return to main results Retrieve Phyre Job Id

Job DescriptionP60778
Confidence100.00%DateThu Jan 5 12:07:09 GMT 2012
Rank4Aligned Residues381
% Identity12%Templated1pv7a_
SCOP infoMFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter
Resolution3.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30... ......40.........50.........60.........70.........80....
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Query Sequence  RIKLTWISFLSYALTGALVIVTGMVMGN. IADYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMV
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Template Sequence  KNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGML
Template Known Secondary structure  S


TTT
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   85....90.........100.........110.........120.........130...... ...140.........150.........160
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Query Sequence  LAVAGLMFSHSLALFSAAMFILGVVSGITMSIGTFLVTQMYEGRQRGSRLLF. . . . TDSFFSMAGMIFPMIAAFLLARSI
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Template Sequence  VMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI
Template Known Secondary structure  TTTT
TTTTGGGGGTTS

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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   161........170.........180.........190.........200....... ..210.........220.....
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Query Sequence  EWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIG. . . . . . . . . . . . . . . VLFLSVAALCYILGQLGF
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Template Sequence  NNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFA
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   226...230.........240.........250.........260.........270.........280.........290.........300.....
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Query Sequence  ISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTVLAGLAAILMYVFNTGTPAHMAWSILALGF
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Template Sequence  NFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMF
Template Known Secondary structure  TTSSS
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   245....250.........260.........270.........280.........290.........300.........310.........320....
 
   306...310.........320..... ....330........ .340.........350.........360.........370.........380...
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Query Sequence  FSSAIYTTIITLGSQQTKVP. SPKLVNFVLTCGT. IGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSR
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Template Sequence  EVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTL. . . .
Template Known Secondary structure  S
GGGTTT
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   325....330.........340.........350.........360.........370.........380.........390.........400
 
   384.....390.
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Query Sequence  HRQHNTLT
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Template Sequence  . SGPGPLS
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   401......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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