Job Description P60778 Confidence 3.79% Date Thu Jan 5 12:07:09 GMT 2012 Rank 14 Aligned Residues 198 % Identity 11% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	S	N	R	I	K	L	T	W	I	S	F	L	S	Y	A	L	T	G	A	L	V	I	V	T	G	M	V	M	G	N	I	A	D	Y	F	N	L	P	V	S	S	M	S	N	T	F	T	F	L	N	A	G	I	L	I	S	I	F	L	N	A	W	L	M	E	I	V	P	L	K	T	Q	L	R	F	G	F	L
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.
Template Sequence		P	I	E	S	D	A	T	S	D	R	F	S	M	L	G	S	M	V	L	W	L	F	W	P	S	F	A	T	A	I	.	.	.	.	.	.	.	.	V	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	G	K	A	S	I	V	D	M	A
Template Known Secondary structure																														T	T	.	.	.	.	.	.	.	.	S		G	G	G																											T	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.									.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	V	L	A	V	A	G	L	M	F	S	H	S	L	A	L	F	S	A	A	M	F	I	L	G	V	V	S	G	I	T	M	S	I	G	T	F	L	V	T	Q	M	Y	E	G	R	Q	R	G	S	R	L	L	F	T	D	S	F	F	S	M	A	G	M	I	F	P	M	I	A	A	F	L	L	A	R	S	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	A	L	A	G	G	V	A	I	G	S	V	C	N	I	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V
Template Known Secondary structure				T	T							T	T	T	T	T	T	S																						T									S					T	T						T	T														S	T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		W	Y	W	V	Y	A	C	I	G	L	V	Y	V	A	I	.	.	.	F	I	L	T	F	G	C	E	F	P	A	L	G	K	H	A	P	K	T	D	A	P	V	E	K	E	K	W	G	I	G
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		A	Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E	F	I	H	L	A	G	P	E	D	E
Template Known Secondary structure																											T	T				S	S	T	T		G	G	G	T	S	S	S				G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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