Job Description P0AEA5 Confidence 94.36% Date Thu Jan 5 11:22:52 GMT 2012 Rank 2 Aligned Residues 191 % Identity 13% Template c3ts7B_ PDB info PDB header:transferase Chain: B: PDB Molecule:geranyltranstransferase; PDBTitle: crystal structure of farnesyl diphosphate synthase (target efi-501951)2 from methylococcus capsulatus Resolution 1.94 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	P	G	I	I	F	G	N	L	I	S	V	I	G	G	F	L	L	A	S	K	G	S	I	D	Y	P	L	F	I	Y	T	L	V	G	V	S	L	V	V	A	S	G	C	V	F	N	N	Y	I	D	R	D	I	D	R	K	M	E	R	T	K	N	R	V	L	V	K	G	L	I	S	P	A	V	S	L	V	Y
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Sequence		M	R	P	L	L	T	Y	A	T	G	Q	T	I	.	.	.	.	.	.	.	.	.	.	G	V	A	A	D	L	L	D	G	P	A	C	A	V	E	F	I	H	V	Y	S	L	I	H	D	D	L	P	A	M	D	D	D	D	L	R	.	.	.	R	G	K	P	T	C	H	K	A	Y	D	E	A	T	A	I	L	A
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	T			G	G	G	T																			T	S	T	T	T	T			S	B	S	.	.	.	S	S	S	B						S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.											.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.												.	.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query SS confidence																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query Sequence		A	T	L	L	G	I	A	G	F	M	L	L	W	F	G	A	N	.	.	.	P	L	A	C	W	L	G	V	M	G	F	V	V	Y	V	G	V	Y	S	.	.	.	.	.	.	.	.	.	.	.	L	Y	M	K	R	H	S	V	Y	G	T	L	I	G	.	.	.	.	.	S	L	S	G	A	A	P	P	V	I	G
Query Conservation																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Alig confidence																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation
Template Sequence		G	D	G	L	Q	A	L	A	F	H	V	L	A	Q	D	P	S	I	A	V	P	A	E	N	R	I	A	M	I	E	T	L	A	K	A	S	G	P	A	G	M	V	G	G	Q	A	I	D	L	A	S	V	G	K	K	L	D	L	P	G	L	E	N	M	H	I	R	K	T	G	A	L	I	R	A	S	V	R	L	A
Template Known Secondary structure																	T	T																				S	T	T	T										T	T	T	T																T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	A	V	T	G	E	F	D	S	G	A	A	I	L	L	A	I	F	S	L	W	Q	M	P	H	S	Y	A	I	A	I	F	R	F	K	D	Y	Q	A	A	N	I	P	V	L	P	V	V	K	G	I	S	V	A	K	N	H	I	T	L	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	L	A	R	P	G	L	P	A	E	Q	F	D	R	L	D	H	Y	A	K	C	I	G	L	A	F	Q	I	Q	D	D	I	L	D	E	E	S	D	T	Q	T	L	K	P	N	Y	P	A	L	L	G	L	S	G	A	K	E	K	A	E	E	M	H
Template Known Secondary structure				T	S	T	T																																	T	S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions