Job Description P0AEA5 Confidence 50.71% Date Thu Jan 5 11:22:52 GMT 2012 Rank 17 Aligned Residues 173 % Identity 16% Template c3mzvB_ PDB info PDB header:transferase Chain: B: PDB Molecule:decaprenyl diphosphate synthase; PDBTitle: crystal structure of a decaprenyl diphosphate synthase from2 rhodobacter capsulatus Resolution 1.90 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	G	F	L	L	A	S	K	G	S	I	D	Y	P	L	F	I	Y	T	L	V	G	V	S	L	V	V	A	S	G	C	V	F	N	N	Y	I	D	R	D	I	D	R	K	M	E	R	T	K	N	R	V	L	V	K	G	L	I	S	P	A	V	S	L	V	Y	A	T	L	L	G	I	A	G	F	M	L	L
Query Conservation
Alig confidence																																																.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		P	M	L	T	L	A	A	A	R	L	V	G	Y	G	G	P	F	H	V	H	L	A	A	T	V	E	F	I	H	T	A	T	L	L	H	D	D	V	V	D	E	S	R	Q	R	R	.	.	.	.	.	G	R	P	T	A	N	L	L	W	D	N	K	S	S	V	L	V	G	D	Y	L	F	A	R	S	F	Q	L	M
Template Known Secondary structure												T	T				S																								T	T		S			T	.	.	.	.	.	T								S
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.																	.	.
Query SS confidence																								.	.	.	.	.	.	.	.																	.	.
Query Sequence		W	F	G	A	N	P	L	A	C	W	L	G	V	M	G	F	V	V	Y	V	G	V	.	.	.	.	.	.	.	.	Y	S	L	Y	M	K	R	H	S	V	Y	G	T	L	I	G	.	.	S	L	S	G	A	A	P	P	V	I	G	Y	C	A	V	T	G	E	F	D	S	G	A	A	I	L	L	A	I	F	S	L
Query Conservation																								.	.	.	.	.	.	.	.																	.	.
Alig confidence																								.	.	.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		T	D	T	G	N	M	R	V	M	E	I	L	A	N	A	S	A	V	I	A	E	G	E	V	L	Q	L	T	A	A	Q	N	L	A	T	T	E	D	I	Y	L	R	V	I	R	G	K	T	A	A	L	F	S	A	A	T	E	V	G	G	I	I	G	G	A	P	E	D	Q	V	Q	A	L	F	D	Y	G	D	A	L
Template Known Secondary structure			T	T																											T	T		T	T														T															T	T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.												.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Q	M	P	H	S	Y	A	I	A	I	F	R	F	K	.	.	.	.	.	.	.	.	.	.	.	D	Y	Q	A	A	N	I	P	V	L	P	V	V	K
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	G	I	A	F	Q	I	V	D	D	L	L	D	Y	G	G	K	S	A	E	I	G	K	N	T	G	D	D	F	R	E	R	K	L	T	M	P	V	I	K
Template Known Secondary structure		.													T	T	T	T	T	T				T	T		S					T	T
Template Predicted Secondary structure		.
Template SS confidence
			213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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