Job Description P0AEA5 Confidence 6.41% Date Thu Jan 5 11:22:52 GMT 2012 Rank 47 Aligned Residues 191 % Identity 9% Template c3lomA_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase; PDBTitle: crystal structure of geranyltransferase from legionella2 pneumophila Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	P	G	I	I	F	G	N	L	I	S	V	I	G	G	F	L	L	A	S	K	G	S	I	D	Y	P	L	F	I	Y	T	L	V	G	V	S	L	V	V	A	S	G	C	V	F	N	N	Y	I	D	R	D	I	D	R	K	M	E	R	T	K	N	R	V	L	V	K	G	L	I	S	P	A	V	S	L	V	Y
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Sequence		I	R	P	I	L	V	Y	L	A	G	D	L	I	.	.	.	.	.	.	.	.	.	.	D	V	D	Q	G	V	L	D	I	I	A	A	A	L	E	L	T	H	C	Y	S	L	I	H	D	D	L	P	A	M	D	N	D	D	L	R	.	.	.	R	G	K	P	S	C	H	K	A	F	D	E	A	T	A	I	L	V
Template Known Secondary structure														T	.	.	.	.	.	.	.	.	.	.	T																										S	T	T	T	T			S			.	.	.	T	T								S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.											70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																.	.	.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Query Sequence		A	T	L	L	G	I	A	G	F	M	L	L	W	F	G	A	N	P	L	A	C	W	L	G	V	M	G	F	V	V	Y	V	G	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	Y	M	K	R	H	S	V	Y	G	T	L	I	G	.	.	.	.	.	S	L	S	G	A	A	P	P	V	I
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		G	D	G	M	Q	A	L	A	I	E	V	L	L	M	R	L	S	P	L	L	P	A	A	Q	V	V	A	I	T	Q	V	L	V	N	A	S	G	I	S	G	M	V	S	G	Q	S	L	D	L	S	E	L	A	K	S	S	V	T	E	E	Q	L	R	E	I	H	L	L	K	T	G	K	L	I	L	A	C	F	E	M
Template Known Secondary structure																		T	T	T	S																	S	T	T	T											T	T	T	S	S															T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	C	A	V	T	G	E	F	D	S	G	A	A	I	L	L	A	I	F	S	L	W	Q	M	P	H	S	Y	A	I	A	I	F	R	F	K	D	Y	Q	A	A	N	I	P	V	L	P	V	V	K	G	I	S	V	A	K	N	H	I	T	L	Y	I	I	A	F	A
Query Conservation
Alig confidence																																									.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		V	L	A	A	Q	H	E	V	S	E	Q	I	K	S	A	L	R	T	Y	G	K	H	I	G	L	V	F	Q	M	Q	D	D	Y	L	D	L	Y	A	P	.	.	.	.	K	T	T	F	A	T	L	F	N	K	Q	Q	L	E	E	E	I	A	V	H	Y	Q	I	A	M
Template Known Secondary structure				T	T		S	S																																	.	.	.	.								S
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions