Job Description P0AEA5 Confidence 36.44% Date Thu Jan 5 11:22:52 GMT 2012 Rank 24 Aligned Residues 176 % Identity 11% Template c3llwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase (ispa); PDBTitle: crystal structure of geranyltransferase from helicobacter2 pylori 26695 Resolution 2.30 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	P	L	F	I	Y	T	L	V	G	V	S	L	V	V	A	S	G	C	V	F	N	N	Y	I	D	R	D	I	D	R	K	M	E	R	T	K	N	R	V	L	V	K	G	L	I	S	P	A	V	S	L	V	Y	A	T	L	L	G	I	A	G	F	M	L	L	W	F	G	A	N	P	L	A	C	W	L	G	V
Query Conservation
Alig confidence																																				.	.	.
Template Conservation																																				.	.	.
Template Sequence		Q	Q	T	E	Y	F	K	I	A	L	S	I	E	C	L	H	T	Y	S	L	I	H	D	D	L	P	C	M	D	N	A	A	L	R	.	.	.	R	N	H	P	T	L	H	A	K	Y	D	E	T	T	A	V	L	I	G	D	A	L	N	T	Y	S	F	E	L	L	S	N	A	L	L	E	S	H	I	I	V	E	L
Template Known Secondary structure		S																							T	S	T	T	T	T			S			.	.	.	T	T								T																							S		S
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.												.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query Sequence		M	G	F	V	V	Y	V	G	V	Y	S	L	.	.	.	.	.	.	.	.	.	.	.	Y	M	K	R	H	S	V	Y	G	T	L	I	G	.	.	.	.	.	S	L	S	G	A	A	P	P	V	I	G	Y	C	A	V	T	G	E	F	D	S	G	A	A	I	L	L	A	I	F	S	L	W	Q	M	P	H	S	Y
Query Conservation														.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		I	K	I	L	S	A	N	G	G	I	K	G	M	I	L	G	Q	A	L	D	C	Y	F	E	N	T	P	L	N	L	E	Q	L	T	F	L	H	E	H	K	T	A	K	L	I	S	A	S	L	I	M	G	L	V	A	S	G	I	K	D	E	E	L	F	K	W	L	Q	A	F	G	L	K	M	G	L	C	F	Q	V
Template Known Secondary structure										S	T	T	T											T	T	T	S															T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	I	F	R	F	K	D	Y	Q	A	A	N	I	P	V	L	P	V	V	K	G	I	S	V	A	K	N	H	I	T	L	Y	I	I	A	F	A
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		L	D	D	I	I	.	.	.	.	D	V	T	Q	A	K	N	S	F	V	N	L	L	G	L	E	R	A	N	N	Y	A	Q	T	L	K	T	E	V	L
Template Known Secondary structure							.	.	.	.							S
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		227	.	.	230	.					.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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