Job Description P0AEA5 Confidence 6.59% Date Thu Jan 5 11:22:52 GMT 2012 Rank 45 Aligned Residues 175 % Identity 10% Template c3lk5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranylgeranyl pyrophosphate synthase; PDBTitle: crystal structure of putative geranylgeranyl pyrophosphate synthase2 from corynebacterium glutamicum Resolution 1.90 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	P	G	I	I	F	G	N	L	I	S	V	I	G	G	F	L	L	A	S	K	G	S	I	D	Y	P	L	F	I	Y	T	L	V	G	V	S	L	V	V	A	S	G	C	V	F	N	N	Y	I	D	R	D	I	D	R	K	M	E	R	T	K	N	R	V	L	V	K	G	L	I	S	P	A	V	S	L	V	Y
Query Conservation
Alig confidence																		.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	P	L	Y	A	W	A	G	F	L	A	A	Q	G	H	.	.	.	.	K	N	S	S	E	K	L	E	S	V	L	D	A	A	A	S	L	E	F	I	Q	A	C	A	L	I	H	D	D	I	I	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	V	S	V	S	I	L	A
Template Known Secondary structure																T	T	.	.	.	.	S			S	S																											T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																			.	.	.	.	.	.	120	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.														.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		A	T	L	L	G	I	A	G	F	M	L	L	W	F	G	A	N	P	L	A	C	W	L	G	V	M	G	F	V	V	Y	V	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	L	Y	M	K	R	H	S	V	Y	G	T	L	I	G	S	L	S	G	A	.	.	A	P	P	V	I	G	Y	C	A	V
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		G	D	X	A	L	V	W	A	E	D	X	L	Q	D	S	G	L	S	A	E	A	L	A	R	T	R	D	A	W	R	G	X	R	T	E	V	I	G	G	Q	L	L	D	I	Y	L	E	S	H	A	N	E	S	V	E	L	A	D	S	V	N	R	F	K	T	A	A	Y	T	I	A	R	P	L	H	L	G	A	S	I
Template Known Secondary structure															T	S																																		T	T															T					T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.												.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	E	F	D	S	G	A	A	I	L	L	A	I	F	S	L	W	Q	M	P	H	S	Y	A	I	A	I	F	R	F	K	.	.	.	.	.	.	.	.	.	.	.	D	Y	Q	A	A	N	I	P	V	L	P	V	V	K	G	I	S	V	A	K
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	G	S	P	Q	L	I	D	A	L	L	H	Y	G	H	D	I	G	I	A	F	Q	L	R	D	D	L	L	G	V	F	G	D	P	A	I	T	G	K	P	A	G	D	D	I	R	E	G	K	R	T	V	L	L	A	L	A	L	Q	R	A	D
Template Known Secondary structure		T	T																															S						S	S		T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions