Job Description P0AEA5 Confidence 5.26% Date Thu Jan 5 11:22:52 GMT 2012 Rank 50 Aligned Residues 177 % Identity 15% Template c3ipiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase; PDBTitle: crystal structure of a geranyltranstransferase from the2 methanosarcina mazei Resolution 1.90 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	I	S	V	I	G	G	F	L	L	A	S	K	G	S	I	D	Y	P	L	F	I	Y	T	L	V	G	V	S	L	V	V	A	S	G	C	V	F	N	N	Y	I	D	R	D	I	D	R	K	M	E	R	T	K	N	R	V	L	V	K	G	L	I	S	P	A	V	S	L	V	Y	A	T	L	L	G	I	A	G
Query Conservation
Alig confidence																			.	.	.	.																								.	.	.						.	.
Template Conservation																			.	.	.	.																								.	.	.						.	.
Template Sequence		P	I	I	L	L	L	V	S	E	I	C	S	G	S	Y	S	R	.	.	.	.	S	L	N	A	A	L	A	V	E	X	X	H	S	A	S	L	I	H	D	D	L	L	D	.	.	.	Q	G	L	V	R	.	.	R	N	L	P	S	A	P	E	K	F	G	P	S	G	A	L	L	C	G	D	Y	L	I	A	K	S
Template Known Secondary structure														S			G	G	.	.	.	.	G																							.	.	.			T	S		.	.	T	T	S						S	S
Template Predicted Secondary structure																			.	.	.	.																								.	.	.						.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		F	M	L	L	W	F	G	A	N	P	L	A	C	W	L	G	V	M	G	F	V	V	Y	V	G	V	Y	S	L	Y	M	K	R	H	S	V	Y	G	T	L	I	G	.	.	S	L	S	G	A	A	P	P	V	I	G	Y	C	A	V	T	G	E	F	D	S	G	A	A	I	L	L	A	I	F	S	L	W	Q	M	P
Query Conservation																																												.	.
Alig confidence																													.															.	.																			.
Template Conservation																													.																																			.
Template Sequence		I	A	F	I	S	P	Y	G	E	K	V	I	Q	D	F	G	K	A	G	X	D	X	A	E	G	E	V	.	L	D	L	K	E	N	D	Y	F	K	C	I	Y	K	K	T	A	S	L	F	A	I	S	A	S	I	G	A	Y	T	G	G	A	E	.	E	E	L	A	E	R	F	S	H	F	G	N	A	L	G	T	A
Template Known Secondary structure						G	G	G																					.																T															T	T			.
Template Predicted Secondary structure																													.																																			.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	Y	A	I	A	I	F	R	F	K	D	Y	Q	A	A	N	I	P	V	L	P	V	V	K	G	I	S	V	A	K	N
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		Y	Q	I	V	D	D	I	L	E	F	L	E	V	V	E	G	E	.	.	T	L	P	H	I	Y	X	K	S	T	S	K	E
Template Known Secondary structure																			.	.							T	T	T	S
Template Predicted Secondary structure																			.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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