Job Description P0AEA5 Confidence 5.80% Date Thu Jan 5 11:22:52 GMT 2012 Rank 49 Aligned Residues 86 % Identity 9% Template c3am6C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:rhodopsin-2; PDBTitle: crystal structure of the proton pumping rhodopsin ar2 from marine alga2 acetabularia acetabulum Resolution 3.20 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		I	S	V	A	K	N	H	I	T	L	Y	I	I	A	F	A	V	A	T	L	M	L	S	L	G	.	.	G	Y	A	G	Y	K	Y	L	V	V	A	A	A	V	S	V	W	W	L	G	M	A	L	R	G	Y	K	V	A	D	D	R	I	W	A	R	K	L	F	G	F	S	I	I	A	I	T	A	L	S	V	M	M
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		G	G	V	M	I	S	W	V	I	G	A	D	I	F	M	I	V	F	G	I	L	G	A	F	E	D	E	H	K	F	K	W	V	Y	F	I	A	G	C	V	M	Q	A	V	L	T	Y	G	M	Y	N	A	T	W	K	D	D	K	S	P	E	Y	H	S	S	Y	V	S	L	L	V	F	L	S	I	L	W	V	F	Y
Template Known Secondary structure																									T																															S																							T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	F	M	V	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	V	W	A	F	G	S
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions