Job Description P0AEA5 Confidence 71.14% Date Thu Jan 5 11:22:52 GMT 2012 Rank 6 Aligned Residues 178 % Identity 12% Template c2o1oB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative farnesyl pyrophosphate synthase; PDBTitle: cryptosporidium parvum putative polyprenyl pyrophosphate2 synthase (cgd4_2550) in complex with risedronate. Resolution 2.42 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	I	S	V	I	G	G	F	L	L	A	S	K	G	S	I	D	Y	P	L	F	I	Y	T	L	V	G	V	S	L	V	V	A	S	G	C	V	F	N	N	Y	I	D	R	D	I	D	R	K	M	E	R	T	K	N	R	V	L	V	K	G	L	I	S	P	A	V	S	L	V	Y	A	T	L	L	G	I	A	G
Query Conservation
Alig confidence																																														.	.	.						.	.
Template Conservation																																														.	.	.						.	.
Template Sequence		G	K	I	L	V	L	I	S	S	L	S	S	A	Y	S	N	I	K	R	D	S	I	Y	L	L	G	W	V	V	E	A	I	Q	A	L	I	L	I	A	D	D	I	M	D	.	.	.	S	G	K	F	R	.	.	R	G	A	P	C	W	Y	I	V	H	G	Q	S	N	A	I	N	D	I	F	F	L	K	M	L	S
Template Known Secondary structure												S	S		S		S	T																											T	.	.	.	T					.	.	T	T
Template Predicted Secondary structure																																														.	.	.						.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		98	.	100	.	.	.	.	.	.	.														.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Query Sequence		F	M	L	L	W	F	G	A	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	C	W	L	G	V	M	G	F	V	V	Y	V	G	V	Y	S	L	Y	M	K	R	H	S	V	Y	G	T	L	.	.	.	.	.	.	.	I	G	S	L	S	G	A	A	P	P	V	I	G	Y	C	A	V	T	G	E
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	L	I	F	E	L	S	S	V	F	G	N	D	I	V	M	K	I	Q	K	I	Y	N	E	S	I	F	F	T	V	L	G	Q	H	L	D	L	S	Y	F	D	L	S	K	A	D	K	I	S	E	R	Y	F	S	M	V	E	M	K	T	S	R	Y	T	F	Y	M	P	V	F	F	G	L	T	L	S	E	I	Q
Template Known Secondary structure							T	T																																S				S	S			S	S													T					T												T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		158	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure								.																												.	.	.	.	.	.
Query SS confidence								.																												.	.	.	.	.	.
Query Sequence		F	D	S	G	A	A	.	I	L	L	A	I	F	S	L	W	Q	M	P	H	S	Y	A	I	A	I	F	R	F	K	D	Y	Q	A	.	.	.	.	.	.	A	N	I	P	V	L	P	V	V	K
Query Conservation								.																												.	.	.	.	.	.
Alig confidence								.																												.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	S	A	Q	L	N	L	I	E	A	I	L	Y	K	L	G	E	F	Y	Q	V	H	N	D	V	S	D	Y	L	F	N	D	S	N	A	D	D	I	C	R	F	K	L	T	W	P	L	Q	K
Template Known Secondary structure				S	S	T	T																												S	T	T	S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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