Job Description P0AEA5 Confidence 4.88% Date Thu Jan 5 11:22:52 GMT 2012 Rank 54 Aligned Residues 86 % Identity 10% Template c2jagA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:halorhodopsin; PDBTitle: l1-intermediate of halorhodopsin t203v Resolution 1.93 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		I	S	V	A	K	N	H	I	T	L	Y	I	I	A	F	A	V	A	T	L	M	L	S	L	G	G	Y	.	.	.	A	G	Y	K	Y	L	V	V	A	A	A	V	S	V	W	W	L	G	M	A	L	R	G	Y	K	V	A	D	D	R	I	W	A	R	K	L	F	G	F	S	I	I	A	I	T	A	L	S	V	M
Query Conservation																													.	.	.
Alig confidence																													.	.	.
Template Conservation
Template Sequence		D	L	G	S	L	F	T	V	I	A	A	D	I	G	M	C	V	T	G	L	A	A	A	M	T	T	S	A	L	L	F	R	W	A	F	Y	A	I	S	C	A	F	F	V	V	V	L	S	A	L	V	T	D	W	A	A	S	A	S	S	A	G	T	A	E	I	F	D	T	L	R	V	L	V	V	V	L	W	L	G
Template Known Secondary structure																												S																									T									T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	V	D	F	M	V	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	P	I	V	W	A	V	G	V
Template Known Secondary structure									S	T
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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