Job Description P0AEA5 Confidence 8.79% Date Thu Jan 5 11:22:52 GMT 2012 Rank 40 Aligned Residues 184 % Identity 15% Template c2h8oA_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase; PDBTitle: the 1.6a crystal structure of the geranyltransferase from2 agrobacterium tumefaciens Resolution 1.60 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	P	G	I	I	F	G	N	L	I	S	V	I	G	G	F	L	L	A	S	K	G	S	I	D	Y	P	L	F	I	Y	T	L	V	G	V	S	L	V	V	A	S	G	C	V	F	N	N	Y	I	D	R	D	I	D	R	K	M	E	R	T	K	N	R	V	L	V	K	G	L	I	S	P	A	V	S	L	V	Y
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Sequence		L	R	P	F	L	V	I	E	S	V	A	L	L	.	.	.	.	.	.	.	.	.	.	G	G	D	A	E	A	G	L	H	V	G	A	A	L	E	C	L	H	C	Y	S	L	V	H	D	D	L	P	A	M	D	D	D	D	L	R	.	.	.	R	G	Q	P	T	V	H	R	K	F	D	E	A	T	A	I	L	A
Template Known Secondary structure														T	.	.	.	.	.	.	.	.	.	.	T																									T	S	T	T	T	T			S			.	.	.	T	T								S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100											.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	L	L	G	I	A	G	F	M	L	L	W	F	G	A	N	P	L	A	C	W	L	G	V	M	G	F	V	V	Y	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	S	L	Y	M	K	R	H	S	V	Y	G	T	L	I	G	S	L	S	G	A	A	P	P	V	I	G	Y
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	S	L	L	T	L	A	F	D	I	I	A	S	D	D	N	P	L	A	A	E	R	K	A	A	L	V	I	S	L	A	R	A	A	G	I	G	G	M	A	G	G	Q	A	L	D	L	A	A	E	K	K	A	P	D	E	D	G	I	I	T	L	Q	A	M	K	T	G	A	L	L	R	F	A	C	E	A	G	A
Template Known Secondary structure															S	T	T	S		S																	S	T	T	S														S															T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	V	T	G	E	F	D	S	G	A	A	I	L	L	A	I	F	S	L	W	Q	M	P	H	S	Y	A	I	A	I	F	R	F	K	D	Y	Q	A	A	N	I	P	V	L	P	V	V	K	G	I	S	V	A	K	N	H	I	T	L	Y	I
Query Conservation
Alig confidence								.																												.	.	.	.	.	.
Template Conservation								.																												.	.	.	.	.	.
Template Sequence		I	I	A	G	S	N	.	Q	A	E	R	Q	R	L	R	L	F	G	E	K	I	G	L	S	F	Q	L	A	D	D	L	L	D	L	.	.	.	.	.	.	T	K	G	T	L	V	A	L	R	G	E	A	W	A	R	E	K	L	Q	E	Q	V
Template Known Secondary structure					T			.																												.	.	.	.	.	.
Template Predicted Secondary structure								.																												.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions