Job Description P0AEA5 Confidence 4.37% Date Thu Jan 5 11:22:52 GMT 2012 Rank 59 Aligned Residues 170 % Identity 12% Template c2azjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:geranylgeranyl pyrophosphate synthetase; PDBTitle: crystal structure for the mutant d81c of sulfolobus2 solfataricus hexaprenyl pyrophosphate synthase Resolution 2.40 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	G	F	L	L	A	S	K	G	S	I	D	Y	P	L	F	I	Y	T	L	V	G	V	S	L	V	V	A	S	G	C	V	F	N	N	Y	I	D	R	D	I	D	R	K	M	E	R	T	K	N	R	V	L	V	K	G	L	I	S	P	A	V	S	L	V	Y	A	T	L	L	G	I	A	G	F	M	L	L
Query Conservation
Alig confidence																																										.	.	.						.	.
Template Conservation																																										.	.	.						.	.
Template Sequence		G	T	L	N	M	F	F	T	V	A	L	G	G	D	I	K	D	S	Y	G	G	A	L	A	I	E	I	L	H	S	A	S	L	A	L	C	D	I	V	D	.	.	.	L	D	A	T	R	.	.	R	G	D	K	A	A	W	V	V	Y	G	N	R	K	V	I	F	I	T	N	Y	L	I	P	T	A	L	R	I	I
Template Known Secondary structure											T	T	T			S	G	G	G																							.	.	.			S		S	.	.		S
Template Predicted Secondary structure																																										.	.	.						.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		W	F	G	A	N	P	L	A	C	W	L	G	V	M	G	F	V	V	Y	V	G	V	Y	S	L	Y	M	K	R	H	S	V	Y	G	T	L	I	G	.	.	.	S	L	S	G	A	A	P	P	V	I	G	Y	C	A	V	T	G	E	F	D	S	G	A	A	I	L	L	A	I	F	S	L	W	Q	M	P	H	S	Y
Query Conservation																																								.	.	.
Alig confidence																																								.	.	.																										.	.
Template Conservation																																																																				.	.
Template Sequence		Q	T	S	Y	G	D	D	A	L	N	T	S	I	E	L	W	K	D	T	S	V	G	A	L	R	D	M	Y	D	N	S	D	Y	I	R	T	I	E	L	K	T	G	S	L	F	K	L	S	T	V	L	S	A	Y	A	S	K	H	Y	N	T	K	Q	Q	M	L	.	.	D	V	G	K	Y	L	G	I	I	Y	Q	V
Template Known Secondary structure																													S	S												T															T	T		G	G	G						.	.
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.																.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	A	I	F	R	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	Q	A	A	N	I	P	V	L	P	V
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	D	F	V	D	Y	K	T	K	K	V	E	E	I	D	G	S	A	K	Q	L	F	K	Y	Y	R	E	G	K	L	E	E	Y	V
Template Known Secondary structure							T	T	T	S	S		S	S				S					T					T	T	S
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions