Job Description P42593 Confidence 99.17% Date Thu Jan 5 12:01:40 GMT 2012 Rank 241 Aligned Residues 213 % Identity 18% Template d1xm3a_ SCOP info TIM beta/alpha-barrel ThiG-like ThiG-like Resolution 1.80

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	L	D	L	G	F	T	T	L	K	N	R	V	L	M	G	S	M	H	T	G	L	E	E	Y	P	D	G	A	E	R	L	A	A	F	Y	A	E	R	A	R	H	G	V	A	L	I	V	S	G	G	I	A	P	D	L	T	G	V	G	M	E	G	G	A	M	L	N	D	A	S	Q	I	P	H	H	R	T	I
Query Conservation
Alig confidence																		.	.	.	.	.	.	.																							.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.																							.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	X	L	T	I	G	G	K	S	F	Q	S	R	L	L	L	.	.	.	.	.	.	.	G	T	G	K	Y	P	S	F	D	I	Q	K	E	A	V	A	V	S	E	S	D	I	.	.	.	L	T	F	A	V	R	R	X	N	I	F	L	E	Q	L	D	L	S	K	Y	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T				S						.	.	.	.	.	.	.			S		S	S													T		S		.	.	.					T	T	S	S	T	T			T	T			G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.																							.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.								.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	A	V	H	Q	E	G	G	K	I	A	L	Q	I	L	H	T	G	R	Y	S	Y	Q	P	H	L	V	A	P	S	A	L	Q	A	P	I	N	R	F	V	P	H	E	L	S	H	E	E	I	L	Q	L	I	D	N	F	A	R	C	A	Q	L	A	R	E	A	G	Y	D	G	V	E	V	M	G	S	E	G	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	T	L	L	P	N	T	A	G	A	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	A	V	R	I	A	R	L	A	K	A	S	G	L	C	D	X	I	K	V	E	V	I	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.							T	T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T			S	S						B	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template SS confidence
													67	.	.	70	.	.	.	.	.	.	.																															.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	N	E	F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	G	N	D	F	I	I	I	Y	R	L	S	M	L	D	L	V	E	D	G	G	T	F	A	E	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	I	N
Query Conservation
Alig confidence		.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	G	C	S	R	S	L	L	P	D	P	V	.	.	.	.	.	.	.	.	.	.	.	.	E	T	L	K	A	S	E	Q	L	L	E	E	G	F	I	V	L	P	Y	T	S	D	D	.	.	.	.	.	.	.	.	.	.	.	.	V	V	L	A	R	K	L	E	E	L	G	V	H	A	I	X
Template Known Secondary structure		.	.	.	.	.	.			T	T	T			B				.	.	.	.	.	.	.	.	.	.	.	.												T	T									S		.	.	.	.	.	.	.	.	.	.	.	.											T		S		B
Template Predicted Secondary structure		.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								103	.	.	.	.	.	.	110	.	.	.													.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.													.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		T	G	I	G	W	H	E	A	R	I	P	T	I	A	T	P	V	P	R	G	A	F	S	W	V	T	R	K	L	K	G	H	V	S	L	P	L	V	T	T	N	R	I	N	D	P	Q	V	A	D	D	I	L	S	R	G	D	A	D	M	V	S	M	A	R	P	F	L	A	.	.	D	A	E	L	L	S	K	A	Q
Query Conservation																																																																							.	.
Alig confidence													.	.	.	.	.	.	.	.																																						.													.	.
Template Conservation													.	.	.	.	.	.	.	.																																						.
Template Sequence		P	G	A	S	P	I	G	S	G	Q	G	.	.	.	.	.	.	.	.	I	L	N	P	L	N	L	S	F	I	I	E	Q	A	K	V	P	V	I	V	D	A	G	I	G	S	P	K	D	A	A	Y	A	X	E	L	G	.	A	D	G	V	L	L	N	T	A	V	S	G	A	D	D	P	V	K	X	A	R	A	X
Template Known Secondary structure				S	S	S	T	T					.	.	.	.	.	.	.	.		S													S	S		B				S				S										T	T	.		S					S					T	S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.																																						.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.									.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions