Job Description P42593 Confidence 99.96% Date Thu Jan 5 12:01:40 GMT 2012 Rank 31 Aligned Residues 223 % Identity 20% Template d1vhna_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.59

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	L	M	G	S	M	H	T	G	L	E	E	Y	P	D	G	A	E	R	L	A	A	F	Y	A	E	R	A	R	H	G	V	A	L	I	V	S	G	G	I	A	P	D	L	T	G	V	G	M	E	G	G	A	M	L	N	D	A	S	Q	I	P	H	H	R	T	I	T	E	A	V	H	Q	E	G	G	K	I	A
Query Conservation
Alig confidence										.	.	.	.	.	.	.															.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.															.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	G	L	A	P	X	A	.	.	.	.	.	.	.	G	Y	T	D	S	A	F	R	T	L	A	F	E	W	.	.	G	A	D	F	A	F	S	E	X	V	S	A	K	G	F	L	X	N	S	Q	K	T	E	E	L	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	H	E	R	N	V	A
Template Known Secondary structure									T	.	.	.	.	.	.	.	T	T		S									T	T	.	.	T							S									T	T								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.															.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.								.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.															.	.	.	.	.	60	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	I	L	H	T	G	R	Y	S	Y	Q	P	H	L	V	A	P	S	A	L	Q	A	P	I	N	R	F	V	P	H	E	L	S	H	E	E	I	L	Q	L	I	D	N	F	A	R	C	A	Q	L	A	R	E	A	G	Y	D	G	V	E	V	M	G	S	E	G	Y	L	I	N	E	F	L	T	L	R	T	N	Q
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.										.											.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.										.											.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	E	P	N	E	L	.	.	.	.	.	.	.	.	.	.	.	.	S	E	A	A	R	I	L	S	E	.	K	Y	K	W	I	D	L	N	A	G	.	.	.	.	.	.	.	.	.	C	P	V	R	K	V
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S						.	.	.	.	.	.	.	.	.	.	.	.								T	T	.	T		S								.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.										.											.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.																							.	.	.	70	.	.	.													.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.										.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	G	N	D	F	I	I	I	Y	R	L	S	M	L	D	L	V	E	D	G	G	T	F	A	E	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	I	N	T	G	I	G	W	H	E	A	R	I	P	T
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.
Template Sequence		V	K	E	G	A	G	G	A	L	L	K	D	L	R	H	F	R	Y	I	V	R	E	L	R	K	S	V	S	G	K	F	S	V	K	T	R	L	.	.	.	.	.	.	.	.	G	W	E	K	N	E	V	E	E	I	Y	R	I	L	V	E	E	G	V	D	E	V	F	I	H	T	R	T	V	V	Q	S	F	T	G
Template Known Secondary structure				T	T		G	G	G	G	G	S																	S	S								S	.	.	.	.	.	.	.	.		S	S	S													T	T								S	S		T	T	T	T	T	S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.									.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	P	V	P	R	G	A	F	S	W	V	T	R	K	L	K	G	H	V	S	L	P	L	V	T	T	N	R	I	N	D	P	Q	V	A	D	D	I	L	S	R	G	D	A	D	M	V	S	M	A	R	P	F	L	A	D	A	E	L	L	S	K	A	Q	S
Query Conservation
Alig confidence				.	.	.	.	.	.	.											.	.
Template Conservation				.	.	.	.	.	.	.											.	.
Template Sequence		R	A	.	.	.	.	.	.	.	E	W	K	A	L	S	V	L	E	K	.	.	R	I	P	T	F	V	S	G	D	I	F	T	P	E	D	A	K	R	A	L	E	E	S	G	C	D	G	L	L	V	A	R	G	A	I	G	R	P	W	I	F	K	Q	I	K	D
Template Known Secondary structure				.	.	.	.	.	.	.		G	G	G	G	G	G	S			.	.	S	S						S	S			S														S					S	G	G	G	T	T		T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.											.	.
Template SS confidence
		171	.								.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions