Return to main results Retrieve Phyre Job Id

Job DescriptionP42593
Confidence99.33%DateThu Jan 5 12:01:40 GMT 2012
Rank192Aligned Residues249
% Identity12%Templated1vg0a1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain GDI-like N domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   377..380.........390.........400.........410.........420.........
Predicted Secondary structure 



















...........................
Query SS confidence 




















































. . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  LAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETL. . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 













  

  
  





   


        
         ...........................
Alig confidence 




















































...........................
Template Conservation 







 

 

  


 
  




     

   
    
                                    
Template Sequence  VIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQMWQEQILENEEAIPLSSKDKTIQHVEV
Template Known Secondary structure 

STT


SSSSS
GGG

T

GGGG

TTB
SS








Template Predicted Secondary structure 













































Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   430.........440.........450.........460.........470......
Predicted Secondary structure  .................................



















Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .














































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RYYRRMIEVTGVTLKLNHTVTADQLQAFDETILASGIVPRTPPIDGI
Query Conservation  .................................  
       

                
 






 
    
 
 
Alig confidence  .................................














































Template Conservation                         
 
        
   
         

                

           
Template Sequence  FCYASQRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQL
Template Known Secondary structure 


S




TGGG

SS


SSSTGGGG





SSSS


S
SSS
Template Predicted Secondary structure 











































Template SS confidence 















































































   101........110.........120.........130.........140.........150.........160.........170.........180
 
   477..480.........490.........500.........510.........520.........530.........540.........550......
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  DHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPR
Query Conservation      
      
         
  

      
 
  
   
  
                                   
Alig confidence 






























.















































Template Conservation      
  
   
                   .     
        
   
                        
    
Template Sequence  TMVEKRMLMKFLTFCVEYEEHPDEYRAYEGT. TFSEYLKTQKLTPNLQYFVLHSIAMETTSCTVDGLKATKKFLQCLGRY
Template Known Secondary structure 
TGGG
TTTTS.BTTSSS
TT


S
BTTSS
Template Predicted Secondary structure 








.








Template SS confidence 















































































   285....290.........300.........310..... ....320.........330.........340.........350.........360...
 
   557..560.........570.........580.........590.........600 .........610.........620.........630.
Predicted Secondary structure 















....









Query SS confidence 











































. . . .






























Query Sequence  QIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKI. . . . DDDGLHVVINGETQVLAVDNVVICAGQEPNR
Query Conservation                             
   

 
     
  
....   

     
    
 

 



 
  
  
Alig confidence 
.....





































....






























Template Conservation   .....      
 

   
  

 
     

   
   
  
    
     

    
  
 
  

         
Template Sequence  G. . . . . NTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSEN
Template Known Secondary structure  S.....SSSTT
TTTT
SS

TTT

TTS

SGGGB
TT
Template Predicted Secondary structure 
.....




























Template SS confidence 














































































   366 ...370.........380.........390.........400.........410.........420.........430.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions