Job Description P42593 Confidence 98.25% Date Thu Jan 5 12:01:40 GMT 2012 Rank 432 Aligned Residues 144 % Identity 21% Template d1vc4a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.80

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	C	A	Q	L	A	R	E	A	G	Y	D	G	V	E	V	M	G	S	E	G	Y	L	I	N	E	F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	G	N	D	F	I	I	I	Y	R	L	S	M	L	D	L	V	E	D
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.									.	.								.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.									.	.								.	.	.	.
Template Sequence		V	E	A	A	L	A	Y	A	R	G	G	A	R	A	V	S	V	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	H	R	F	G	G	S	L	L	D	.	.	.	.	.	.	.	.	L	K	R	V	R	E	A	V	.	.	D	L	P	L	L	R	K	.	.	.	.	D	F	V	V	D
Template Known Secondary structure											T	T		S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S							.	.	.	.	.	.	.	.									.	.		S						.	.	.	.	S				S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.									.	.								.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																	.	.	.	90	.	.	.	.	.	.	.									.	.	100	.	.	.	.	.			.	.	.	.	110	.	.					.	.	.	.	.
																								225	.	.	.	.	230	.	.	.	.	.	.	.	.																		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T	F	A	E	T	V	E	L	A	Q	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	A	G	A	T	I	I	N	T	G	I	G	W	H	E	A	R	I	P	T	I	A	T	P	V	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		P	F	M	L	E	E	A	R	A	F	G	A	S	A	A	L	L	I	V	A	L	L	G	E	L	T	G	A	Y	L	E	E	A	R	R	L	G	L	E	A	L	V	E	V	H	T	E	R	E	L	E	I	A	L	E	A	G	A	E	V	L	G	I	N	N	R	D	L	A	T	L	H	I	N	L	E	.	.	.	.
Template Known Secondary structure											T	T		S										G	G	G												T									S											T		S						S	B		T	T	T			B		T	T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		R	G	A	F	S	W	V	T	R	K	L	K	G	H	V	.	S	L	P	L	V	T	T	N	R	I	N	D	P	Q	V	A	D	D	I	L	S	R	G	D	A	D	M	V	S	M	A	R	P	F	L	A	D	A	E	L	L	S	K	A	Q	S
Query Conservation																	.
Alig confidence		.	.														.																		.						.
Template Conservation		.	.																																.						.
Template Sequence		.	.	T	A	P	R	L	G	R	L	A	R	K	R	G	F	G	G	V	L	V	A	E	S	G	Y	S	R	K	E	E	L	K	.	A	L	E	G	L	.	F	D	A	V	L	I	G	T	S	L	M	R	A	P	D	L	E	A	A	L	R	E
Template Known Secondary structure		.	.												T	T			S						S				S						.	T	T	T	T	T	.		S										T	S	S
Template Predicted Secondary structure		.	.																																.						.
Template SS confidence
				194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions