Job Description P42593 Confidence 99.70% Date Thu Jan 5 12:01:40 GMT 2012 Rank 121 Aligned Residues 261 % Identity 13% Template d1tv5a1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.40

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																										.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	D	L	G	F	T	T	L	K	N	R	V	L	M	G	S	M	H	T	G	L	E	E	Y	P	D	G	A	E	R	L	A	A	F	Y	A	E	R	A	R	H	G	V	A	L	I	V	S	G	G	I	A	P	D	L	.	T	G	V	G	M	E	G	G	A	M	L	N	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																										.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.							.	.	.	.	.	.	.																								.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.							.	.	.	.	.	.	.
Template Sequence		C	T	N	I	K	H	L	D	F	I	N	P	F	G	V	A	A	.	.	.	G	F	D	K	N	G	.	.	.	.	.	.	.	V	C	I	D	S	I	L	K	L	G	F	S	F	I	E	I	G	T	I	T	P	R	G	Q	T	G	N	A	K	P	R	I	F	R	D	V	E	S	R	S	I	I	N	S	C	G	F
Template Known Secondary structure						T	T				S	S	S					T	.	.	.	T	T	T	T	T		.	.	.	.	.	.	.	S	S						T	T	T		S									S	S		B			S		S							T	T	T	T								S
Template Predicted Secondary structure																			.	.	.							.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.								.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
										77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	D	A	S	Q	I	P	H	H	R	T	I	T	E	A	V	H	Q	E	G	G	K	I	A	L	Q	I	L	H	T	G	R	Y	S	Y	Q	P	H	L	V	A	P	S	A	L	Q	A	P	I	N	R	F	V	P	H	E	L	S	H	E	E	I	L	Q	L	I	D	N	F	A	R	C	A
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Sequence		N	N	M	G	C	D	K	V	T	E	N	L	I	L	F	R	K	R	Q	E	E	D	K	L	L	S	K	H	I	V	G	V	S	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	K	D	T	V	.	.	.	N	I	V	D	D	L	K	Y	C	I
Template Known Secondary structure			B	S																				S	T	T	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T		S	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.																											.	.	.	.	.	.				320	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.
Query Sequence		Q	L	A	R	E	A	G	Y	D	G	V	E	V	M	G	S	E	G	Y	L	I	N	E	F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	.	.	.	.	.	.	.	G	N	D	F	I	I	I	Y	R	L	S	M	L	D	L
Query Conservation																																																												.	.	.	.	.	.	.
Alig confidence								.										.	.	.	.	.	.	.	.	.			.	.																														.	.	.	.	.	.	.														.	.
Template Conservation								.										.	.	.	.	.	.	.	.	.			.	.																																																		.	.
Template Sequence		N	K	I	G	R	Y	.	A	D	Y	I	A	I	N	V	S	.	.	.	.	.	.	.	.	.	S	P	.	.	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N	I	I	L	S	V	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K	P	L	V	F	V	K	L	A	P	D	.	.
Template Known Secondary structure					G	G	G	.		S								.	.	.	.	.	.	.	.	.		T	.	.	T	S	T	T	G	G	G	G	G	S																								S	S	S	S	S										S		.	.
Template Predicted Secondary structure								.										.	.	.	.	.	.	.	.	.			.	.																																																		.	.
Template SS confidence
		330	.	.	.	.	.		.	.	.	.	340	.	.	.	.										.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.									270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.													.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.													.	.
Query Sequence		V	E	D	G	G	T	F	A	E	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	I	N	T	G	I	G	W	H	E	A	R	I	P	T	I	A	T	P	V	P	R	G	A	F	.	.	.	.	.	.	.	.	S	W	V	T	R	K	L	K	G	H	V	S	.	.	L	P	L	V	T	T	N	R	I	N
Query Conservation																																																		.	.	.	.	.	.	.	.													.	.
Alig confidence		.	.	.	.																																													.	.	.	.	.	.	.	.													.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	L	N	Q	E	Q	K	K	E	I	A	D	V	L	L	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P	I	I	A	S	G	G	I	F
Template Known Secondary structure		.	.	.	.																T	T		S								B	S						G	G	G	T	T			S																						T	T	T		S						S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		D	P	Q	V	A	D	D	I	L	S	R	G	D	A	D	M	V	S	M	A	R	P	F	L	A	D	.	A	E	L	L	S	K	A	Q	S	G
Query Conservation																												.
Alig confidence														.														.
Template Conservation														.
Template Sequence		S	G	L	D	A	L	E	K	I	E	A	G	.	A	S	V	C	Q	L	Y	S	C	L	V	F	N	G	M	K	S	A	V	Q	I	K	R	E
Template Known Secondary structure		S										T	T	.							S							G	G	G
Template Predicted Secondary structure														.
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520	.		.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions