Job Description P42593 Confidence 100.00% Date Thu Jan 5 12:01:40 GMT 2012 Rank 7 Aligned Residues 361 % Identity 20% Template d1oyaa_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.00

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																	.							.	.
Query SS confidence																																	.							.	.
Query Sequence		M	S	Y	P	S	L	F	A	P	L	D	L	G	F	T	T	L	K	N	R	V	L	M	G	S	M	H	T	G	L	E	.	E	Y	P	D	G	A	.	.	E	R	L	A	A	F	Y	A	E	R	A	R	H	G	V	A	L	I	V	S	G	G	I	A	P	D	L	T	G	V	G	M	E	G	G	A	M	L	N	D
Query Conservation																																	.							.	.
Alig confidence																																	.							.	.
Template Conservation
Template Sequence		L	G	D	T	N	L	F	K	P	I	K	I	G	N	N	E	L	L	H	R	A	V	I	P	P	L	T	R	M	R	A	L	H	P	G	N	I	P	N	R	D	W	A	V	E	Y	Y	T	Q	R	A	Q	R	P	G	T	M	I	I	T	E	G	A	F	I	S	P	Q	A	G	G	Y	D	N	A	P	G	V	W	S
Template Known Secondary structure			T	T	S	G	G	G	S					T	T				S	S	S			B									B	T	T	T	T	B			T	T	T									T		S	T	T										S	S	G	G	G				T	T	S		B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.										.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Query Sequence		A	S	Q	I	P	H	H	R	T	I	T	E	A	V	H	Q	E	G	G	K	I	A	L	Q	I	L	H	T	G	R	Y	S	.	.	.	.	.	.	.	Y	Q	P	H	L	V	A	P	S	A	L	Q	.	.	.	.	.	.	.	.	.	A	P	I	N	R	F	V	P	H	E	L	S	H	E	E	I	L	Q	L	I
Query Conservation																																		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	Q	M	V	E	W	T	K	I	F	N	A	I	H	E	K	K	S	F	V	W	V	Q	L	W	V	L	G	W	A	A	F	P	D	N	L	A	R	D	G	L	R	Y	D	S	A	S	D	N	V	F	M	D	A	E	Q	E	A	K	A	K	K	A	N	N	P	Q	H	S	L	T	K	D	E	I	K	Q	Y	I
Template Known Secondary structure																		T	T											G	G	G	S								T	T						S		S	S			S											T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	F	A	R	C	A	Q	L	A	R	E	A	G	Y	D	G	V	E	V	M	G	S	E	G	Y	L	I	N	E	F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	G	N	D	F	I	I	I	Y	R	L	S	M	L	D	L
Query Conservation
Alig confidence																																																																						.
Template Conservation																																																																						.
Template Sequence		K	E	Y	V	Q	A	A	K	N	S	I	A	A	G	A	D	G	V	E	I	H	S	A	N	G	Y	L	L	N	Q	F	L	D	P	H	S	N	T	R	T	D	E	Y	G	G	S	I	E	N	R	A	R	F	T	L	E	V	V	D	A	L	V	E	A	I	G	H	E	.	K	V	G	L	R	L	S	P	Y	G	V
Template Known Secondary structure														T	T		S								T	T	S								T	T	T					S	T	T	S	S	S					T																G	G	.	G							T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure											.	.	.	.	.	.																						.	.
Query SS confidence											.	.	.	.	.	.																						.	.
Query Sequence		V	E	D	G	G	T	F	A	E	.	.	.	.	.	.	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	I	N	T	G	I	G	.	.	W	H	E	A	R	I	P	T	I	A	T	P	V	P	R	G	A	F	S	W	V	T	R	K	L	K	G	H	V	S	L	P	L	V	T	T	N	R	I	N	D	P
Query Conservation											.	.	.	.	.	.																						.	.
Alig confidence											.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		F	N	S	M	S	G	G	A	E	T	G	I	V	A	Q	Y	A	Y	V	A	G	E	L	E	K	R	A	K	A	G	K	R	L	A	F	V	H	L	V	E	P	R	V	T	N	P	F	L	T	E	G	E	G	E	Y	E	G	G	S	N	D	F	V	Y	S	I	W	K	G	P	V	I	R	A	G	N	F	A	L	H
Template Known Secondary structure		T	T	T			G	G	G	S	T	T																		T	T				S							T	T		S		T	T	S		T	T	S	S				S			T	T								S						S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	A	D	D	I	L	S	R	G	D	A	D	M	V	S	M	A	R	P	F	L	A	D	A	E	L	L	S	K	A	Q	S	G	R	A	D	E	I	N	T	C	I	G	C	N	Q	A	C	L	D	Q	I	F	V	G	K	V	T	S	C	L	V	N	P	R	A	C	H	E	T	K	M	P	I	L	P
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		P	E	V	V	R	E	E	V	K	D	K	R	T	L	I	G	Y	G	R	F	F	I	S	N	P	D	L	V	D	R	L	E	K	G	L	P	.	.	.	.	.	.	.	.	L	N	K	Y	D	R	D	T	F	Y	Q	M	S	A	H	G	Y	I	D	Y	P	T	Y	E	E	A	L	K	L	G	W	D	K
Template Known Secondary structure									T	T	S	T	T													T	T								T			.	.	.	.	.	.	.	.		B				G	G	G	S	S		S	S	S	T	T	T	T											T	T	S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.									.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions