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Job Description | P42593 | Confidence | 99.16% | Date | Thu Jan 5 12:01:40 GMT 2012 |
Rank | 242 | Aligned Residues | 88 |
% Identity | 17% | Template | c3tdmD_ |
PDB info |
PDB header:de novo protein | Chain: D: PDB Molecule:computationally designed two-fold symmetric tim-barrel |
PDBTitle: computationally designed tim-barrel protein, halfflr
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Resolution | 2.40 Å |
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230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | T | V | E | L | A | Q | A | I | E | A | A | G | A | T | I | I | N | T | G | I | G | W | H | E | A | R | I | P | T | I | A | T | P | V | P | R | G | A | F | S | W | V | T | R | K | L | K | G | H | V | S | L | P | L | V | T | T | N | R | I | N | D | P | Q | V | A | D | D | I | L | S | R | G | D | A | D | M | V | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | L | R | D | W | V | V | E | V | E | K | R | G | A | G | E | I | L | L | T | S | . |
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I | D | R | D | G | T | K | S | G | Y | D | T | E | M | I | R | F | V | R | P | L | T | T | L | P | I | I | A | S | G | G | A | G | K | M | E | H | F | L | E | A | F | L | R | G | . |
A | D | K | V | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
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310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
M | A | R | P | F | L | A | D | A | E | L | L | S | K | A | Q | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | N | T | A | A | V | E | N | P | S | L | I | T | Q | I | A | Q |
Template Known Secondary structure |   |
| S |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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