Job Description P42593 Confidence 98.72% Date Thu Jan 5 12:01:40 GMT 2012 Rank 334 Aligned Residues 129 % Identity 20% Template c3sqsA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing protein from dinoroseobacter shibae dfl 12 Resolution 1.90 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	N	F	A	R	C	A	Q	L	A	R	E	A	G	Y	D	G	V	E	V	M	G	S	E	G	Y	L	I	N	E	F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	G	N	D	F	I	I	I	Y	R	L	S	M	L	D
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Sequence		I	P	A	M	Q	A	E	A	E	E	A	Q	K	H	G	Y	Q	G	Y	K	T	R	F	G	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	D	G	P	A	G	M	R	E	N	L	K	R	V	E	A	L	R	E	V	L	G	Y	D	V	D	L	M	L	E	C	Y	M	.	.
Template Known Secondary structure														T	T	T		S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G																					S	S	S							T	T	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	E	D	G	G	T	F	A	E	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	I	N	T	G	I	G	W	H	E	A	R	I	P	T	I	A	T	P	V	P	R	G	A	F	S	W	V	T	R	K	L	K	G	H	V	S	L	P	L	V	T	T	N	R	I	N	D	P	Q	V	A	D	D	I	L
Query Conservation
Alig confidence		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		.	.	.	.	G	W	N	L	D	Y	T	K	R	M	L	P	K	L	E	R	F	E	P	R	W	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	V	I	A	D	D	V	A	G	Y	.	A	E	L	N	A	M	G	I	V	P	I	S	G	G	E	H	E	F	S	V	M	G	C	A	E	L	I
Template Known Secondary structure		.	.	.	.		S													G	G	G			S				.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		T	T						.						T		S	S						T	T			S
Template Predicted Secondary structure		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
						241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.															.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		301	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	G	D	A	D	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	K	A	V	S	V	L
Template Known Secondary structure			T	T			S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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