Job Description P42593 Confidence 99.74% Date Thu Jan 5 12:01:40 GMT 2012 Rank 117 Aligned Residues 251 % Identity 14% Template c3oixA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative dihydroorotate dehydrogenase; dihydroorotate PDBTitle: crystal structure of the putative dihydroorotate dehydrogenase from2 streptococcus mutans Resolution 2.40 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.										.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.
Query Sequence		A	P	L	D	L	G	F	T	T	L	K	N	R	V	L	M	G	S	M	H	T	G	L	E	E	Y	P	D	G	A	E	R	L	A	A	F	Y	A	E	R	A	R	H	G	V	A	L	I	V	S	G	G	I	A	P	D	L	T	G	V	G	M	E	G	G	A	M	L	.	.	.	.	.	.	.	.	.	N	D	A
Query Conservation																																																																						.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.
Template Sequence		T	H	T	T	I	G	S	F	D	F	D	N	C	L	M	N	A	A	G	V	Y	C	M	.	.	.	.	.	.	.	.	.	T	R	E	E	L	A	A	I	D	H	S	E	A	G	S	F	V	T	T	G	T	L	E	E	R	A	G	N	P	Q	P	R	Y	A	D	T	K	L	G	S	I	N	S	M	G	L	P	N
Template Known Secondary structure							T	T				S		S					T	T	S	S		S	.	.	.	.	.	.	.	.	.	S									T	S	S		S	B		B			B		S	S		B			S		S							S	S										B
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.										.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		S	Q	I	P	H	H	R	T	I	T	E	A	V	H	Q	E	.	.	G	G	K	I	A	L	Q	I	L	H	T	G	R	Y	S	Y	Q	P	H	L	V	A	P	S	A	L	Q	A	P	I	N	R	F	V	P	H	E	L	S	H	E	E	I	L	Q	L	I	D	N	F	A	R	C	A	Q	L	A	R	E	A	G	Y
Query Conservation																		.	.
Alig confidence																		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	I	N	Y	Y	L	D	Y	V	T	E	L	Q	K	Q	P	D	S	K	N	H	F	L	S	L	V	G	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	E	T	H	T	I	L	M	V	E	A	S	K	Y	Q
Template Known Secondary structure		S															S	T	T											S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T	S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																																			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	V	E	V	M	G	S	E	G	Y	L	I	N	E	F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	G	N	D	F	I	I	I	Y	R	L	S	M	L	D	L	V	E	D	G	G	T	F	A	E	T	V	E	L	A	Q
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template Sequence		G	L	V	E	L	N	L	S	.	.	.	.	.	.	.	.	.	C	P	N	V	P	.	.	.	.	.	.	G	P	Q	I	A	Y	D	F	E	T	T	D	Q	I	L	S	E	V	F	T	Y	F	T	K	P	L	G	I	K	L	P	P	Y	F	D	.	.	.	.	.	.	.	.	.	I	V	H	F	D	Q	A	A
Template Known Secondary structure		S							S	.	.	.	.	.	.	.	.	.				S		.	.	.	.	.	.				G	G	G													T	T	T			S												.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130										.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170										.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.														270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		A	I	E	A	A	G	A	T	I	I	N	T	G	I	G	W	H	E	A	R	I	P	T	I	A	T	P	V	P	R	G	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	V	T	R	K	L	K	G	H	V	S	.	.	L	P	L	V	T	T	N	R	I	N	D	P	Q	V	A	D	D	I	L	S
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.													.	.										.
Template Conservation																																																																							.
Template Sequence		A	I	F	N	Y	P	L	T	F	V	N	C	I	N	S	I	G	N	G	L	V	I	E	D	E	T	V	V	I	P	K	N	G	F	G	G	I	G	G	D	Y	V	K	P	T	A	L	A	N	V	H	A	F	Y	K	R	L	N	P	S	I	Q	I	I	G	T	G	G	V	.	T	G	R	D	A	F	E	H	I	L
Template Known Secondary structure									S																T	T						G	G	G							G	G	G													T	T	S		T	T	S						S			.
Template Predicted Secondary structure																																																																							.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		R	G	D	A	D	M	V	S	M	A	R	P	F	L	A	D	.	A	E	L	L	S	K	A	Q	S	G
Query Conservation																		.
Alig confidence				.														.
Template Conservation				.
Template Sequence		C	G	.	A	S	M	V	Q	I	G	T	A	L	H	Q	E	G	P	Q	I	F	K	R	I	T	K	E
Template Known Secondary structure			T	.		S					S								T
Template Predicted Secondary structure				.
Template SS confidence
		262	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions