Job Description P42593 Confidence 98.36% Date Thu Jan 5 12:01:40 GMT 2012 Rank 414 Aligned Residues 216 % Identity 20% Template c3nm3D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thiamine biosynthetic bifunctional enzyme; PDBTitle: the crystal structure of candida glabrata thi6, a bifunctional enzyme2 involved in thiamin biosyhthesis of eukaryotes Resolution 3.10 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	F	Y	A	E	R	A	R	H	G	V	A	L	I	V	S	G	G	I	A	P	D	L	T	G	V	G	M	E	G	G	A	M	L	N	D	A	S	Q	I	P	H	H	R	T	I	T	E	A	V	H	Q	E	G	G	K	I	A	L	Q	I	L	H	T	G	R	Y	S	Y	Q	P	H	L	V	A	P	S	A
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	G	Q	V	E	A	G	L	Q	N	G	V	T	L	V	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	K	D	A	D	T	K	F	F	I	E	E	A	L	Q	I	K	E	L	C	H	A	H	N	V	P	L	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											S	S								.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S		T	T																T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.														.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	A	P	I	N	R	F	V	P	H	E	L	S	H	E	E	I	L	Q	L	I	D	N	F	A	R	C	A	Q	L	A	R	E	A	G	Y	D	G	V	E	V	M	G	S	E	G	Y	L	I	N	E	F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	R	I	D	V	A	M	A	I	G	A	D	G	I	H	V	G	Q	D	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S									T		S						T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																											75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																																.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	R	E	R	V	G	N	D	F	I	I	I	Y	R	L	S	M	L	D	L	V	E	D	G	G	T	F	A	E	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	I	N	T	G	I	G	W	H	E	A	R	I	P	T	I	A	T	P	V	P	R	G	A	F	S	W	V	T	R	K	L	K	G	H
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		P	M	I	R	K	L	V	G	P	D	M	V	I	G	W	S	V	G	F	P	.	.	.	.	.	.	.	.	.	.	E	E	V	D	E	L	S	K	M	G	P	D	M	V	D	Y	I	G	V	.	.	G	T	L	F	P	T	L	T	K	K	N	K	K	M	G	T	A	G	A	I	R	V	L	D	A	L	E	R	N
Template Known Secondary structure										T	T	S								S	T	.	.	.	.	.	.	.	.	.	.								T	T		T	T	S							.	.				S			S	S																					T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.											.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300									.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																				.	.	.	.	.	.	.	.																	.	.																								.	.	.	.	.	.	.	.
Query SS confidence				.	.																				.	.	.	.	.	.	.	.																	.	.																								.	.	.	.	.	.	.	.
Query Sequence		V	S	.	.	L	P	L	V	T	T	N	R	I	N	D	P	Q	V	A	D	D	I	L	.	.	.	.	.	.	.	.	S	R	G	D	A	D	M	V	S	M	A	R	P	F	L	A	.	.	D	A	E	L	L	S	K	A	Q	S	G	R	A	D	E	I	N	T	C	I	G	C	N	.	.	.	.	.	.	.	.
Query Conservation				.	.																				.	.	.	.	.	.	.	.																	.	.																								.	.	.	.	.	.	.	.
Alig confidence				.	.										.										.	.	.	.	.	.	.	.				.													.	.																								.	.	.	.	.	.	.	.
Template Conservation															.																					.
Template Sequence		N	A	H	W	C	R	T	V	G	I	G	G	L	.	H	P	D	N	I	E	R	V	L	Y	Q	C	V	S	S	N	G	K	R	S	.	L	D	G	I	C	V	V	S	D	I	I	A	S	L	D	A	A	K	S	T	K	I	L	R	G	L	I	D	K	T	D	Y	K	F	V	N	I	G	L	S	T	K	N	S	L
Template Known Secondary structure		T		T	T							S	S		.		T	T	T									B		T	T	S			B	.		S					S	T	T	T	T	T		T	T													T			B				S	S	S							S
Template Predicted Secondary structure															.																					.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
								340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.														.
Query SS confidence		.	.	.	.	.	.														.
Query Sequence		.	.	.	.	.	.	Q	A	C	L	D	Q	I	F	V	G	K	V	T	.	S	C	L	V	N
Query Conservation		.	.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.														.
Template Conservation
Template Sequence		T	T	T	D	E	I	Q	S	I	I	S	N	T	L	K	A	R	P	L	V	Q	H	I	T	N
Template Known Secondary structure																	S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions