Job Description P42593 Confidence 98.60% Date Thu Jan 5 12:01:40 GMT 2012 Rank 358 Aligned Residues 162 % Identity 18% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																															.	.	.	.	.	.						.	.
Query SS confidence																																															.	.	.	.	.	.						.	.
Query Sequence		I	D	N	F	A	R	C	A	Q	L	A	R	E	A	G	Y	D	G	V	E	V	M	G	S	E	G	Y	L	I	N	E	F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	.	.	.	.	.	.	G	D	Y	R	N	.	.	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	G	N	D	F	I	I
Query Conservation																																															.	.	.	.	.	.						.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.						.	.																		.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.																																										.
Template Sequence		P	E	Q	S	L	A	I	M	Q	T	L	I	D	A	G	A	D	A	L	E	L	G	M	.	.	.	.	.	.	.	.	.	.	.	P	F	S	D	P	L	A	D	G	P	T	I	Q	G	A	N	L	R	A	L	A	A	K	T	T	P	D	I	C	F	E	L	I	A	Q	I	R	A	R	N	P	.	E	T	P	I
Template Known Secondary structure															T	T		S	S						.	.	.	.	.	.	.	.	.	.	.					T	T																T	T																		T	.	T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.																																										.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.												.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.
		213	.									.	.	.	.	.	220	.	.	.	.													.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.									.	.	.	.	260	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Query Sequence		I	Y	.	.	.	.	.	.	.	.	R	L	S	M	L	D	L	V	E	D	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T	F	A	E	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	I	N	T	G	I	G	W	H	E	A	.	.	.	.	.	.	.	.	R	I	P	T	I	A	T	P	V
Query Conservation				.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	L	M	Y	A	N	L	V	Y	A	R	G	I	D	D	F	Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	A	D	V	P	T	N	E	S	Q	P	F	V	A	A	A	E	K	F	G	I	Q	P	I	F	I	A	P	P	T	A	S	D	E	T	L	R	A	V	A	Q	L	G	K	G	Y	T	Y	L	L
Template Known Secondary structure												T	T													T							T	T	S		G	G	G											T	T									T	T			S												S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	G	A	F	S	W	V	T	R	K	L	K	G	H	V	S	L	P	L	V	T	T	N	R	I	N	D	P	Q	V	A	D	D	I	L	S	R	G	D	A	D	M	V	S	M	A	R	P	F	L
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		S	R	A	P	V	H	A	L	L	E	R	L	Q	Q	F	D	A	P	P	A	L	L	G	F	G	I	S	E	P	A	Q	V	K	Q	A	I	E	A	G	.	A	A	G	A	I	S	G	S	A	V	V
Template Known Secondary structure																T	T								S	S			S										T	T	.		S					S	S
Template Predicted Secondary structure																																									.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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