Job Description P42593 Confidence 98.21% Date Thu Jan 5 12:01:40 GMT 2012 Rank 443 Aligned Residues 132 % Identity 17% Template c3mqtV_ PDB info PDB header:isomerase Chain: V: PDB Molecule: PDBTitle: crystal structure of a mandelate racemase/muconate lactonizing enzyme2 from shewanella pealeana Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	Q	L	I	D	N	F	A	R	C	A	Q	L	A	R	E	A	G	Y	D	G	V	E	V	M	G	S	E	G	Y	L	I	N	E	F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	G	N	D	F	I	I	I	Y	R	L
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	E	I	V	E	A	Y	K	P	L	I	A	K	A	K	E	R	G	A	K	A	V	K	V	C	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	N	D	K	V	S	D	K	E	I	V	A	Y	L	R	E	L	R	E	V	I	G	W	D	M	D	M	M	V	D	C
Template Known Secondary structure																			T	T		S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S																		S	S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.																						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		S	M	L	D	L	V	E	D	G	G	T	.	F	A	E	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	I	N	T	G	I	G	W	H	E	A	R	I	P	T	I	A	T	P	V	P	R	G	A	F	S	W	V	T	R	K	L	K	G	H	V	S	L	P	L	V	T	T	N	R	I	N	D	P	Q	V
Query Conservation													.
Alig confidence				.	.	.	.	.	.				.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation				.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		L	Y	.	.	.	.	.	.	R	W	T	D	W	Q	K	A	R	W	T	F	R	Q	L	E	D	I	D	L	Y	F	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	C	L	Q	H	D	D	L	I	G	H	.	Q	K	L	A	A	A	I	N	T	R	L	C	G	A	E	M	S	T	T	R	F	E
Template Known Secondary structure		T	T	.	.	.	.	.	.			S												G	G	G	G			S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S		T	T						.							S	S	S						T	T
Template Predicted Secondary structure				.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		208	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.															.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	D	I	L	S	R	G	D	A	D	M	V	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	E	W	L	E	K	T	G	I	S	V	V	Q	S
Template Known Secondary structure												S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions