Phyre 2 alignment of P42593 with c3lzxB

Job Description P42593
Confidence 99.83% Date Thu Jan 5 12:01:40 GMT 2012

Rank 111 Aligned Residues 253

% Identity 17% Template c3lzxB_

PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin--nadp reductase 2; PDBTitle: crystal structure of ferredoxin-nadp+ oxidoreductase from bacillus2 subtilis (form ii)

Resolution 1.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.									.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.
Query Sequence	N	L	A	V	V	G	A	G	P	A	G	L	A	F	A	I	N	A	A	A	R	G	H	Q	V	T	L	F	D	A	H	S	E	I	G	G	Q	F	N	I	A	K	Q	I	P	G	K	E	E	.	.	.	.	.	.	.	.	F	Y	E	T	L	R	Y	Y	R	R	M	I	E	V	T	G	V	T	L	K	L	N	H
Query Conservation																																																		.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	D	I	T	I	I	G	G	G	P	V	G	L	F	T	A	F	Y	G	G	M	R	Q	A	S	V	K	I	I	E	S	L	P	Q	L	G	G	Q	L	S	A	L	Y	P	E	K	Y	I	Y	D	V	A	G	F	P	K	I	R	A	Q	E	L	I	N	N	L	K	E	Q	M	A	K	F	D	Q	T	I	C	L	E	Q
Template Known Secondary structure								S													T	T								S	S	S	S	S									T	T	S					S	T	T		S	S															T	T	S							S
Template Predicted Secondary structure
Template SS confidence
	9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.

	448	.	450	.	.	.	.	.	.	.															.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.					.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Query Sequence	T	V	T	A	D	Q	L	Q	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	T	I	L	A	S	G	I	V	P	R	T	P	P	I	D	G	I	D	H	P	K	V	L	S	Y	L	D	V	L	.	.	.	.	R	D	K	A	P	V	G	N	K	V	A	I	I	G	C	G	G	I	G	F	D
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template Conservation
Template Sequence	A	V	E	S	V	E	K	Q	A	D	G	V	F	K	L	V	T	N	E	E	T	H	Y	S	K	T	V	I	I	T	A	G	N	G	A	F	K	P	R	K	L	E	L	E	N	A	E	Q	Y	E	G	K	N	L	H	Y	F	V	D	D	L	Q	K	F	A	G	R	R	V	A	I	L	G	G	G	D	S	A	V	D
Template Known Secondary structure									T	T	S							S	S													T	T	S										T	T	G	G	G	G	B	T	T	T			S	S				G	G	G	G	T	T	S							S	S
Template Predicted Secondary structure
Template SS confidence
	89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	T	A	M	Y	L	S	Q	P	G	E	S	T	S	Q	N	I	A	G	F	C	N	E	W	G	I	D	S	S	L	Q	Q	A	G	G	L	S	P	Q	G	M	Q	I	P	R	S	P	R	Q	I	V	M	L	Q	R	K	A	S	K	P	G	Q	G	L	G	K	T	T	G	W	I	H	R	T	T	L	L	S	R	G	V
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	W	A	L	M	L	E	P	I	A	K	E	V	S	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	R	D	K	F	R	A	H	E	H	S	V	E	N	L	H	A	S	K	V
Template Known Secondary structure						T	T	T	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	S		S	S											S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	169	170	.	.	.	.	.	.	.	.	.	180	.	.	.																																													.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

	590	.	.	.	.	.	.	.	.	.	600	.	.	.							.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.																.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	K	M	I	P	G	V	S	Y	Q	K	I	D	D	D	.	.	.	.	.	.	G	L	H	V	V	I	N	G	E	T	Q	V	L	A	V	D	N	V	V	I	C	A	G	Q	E	P	N	R	A	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	L	I	D	S	G	K	T	V	H	L	I	G
Query Conservation															.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	N	V	L	T	P	F	V	P	A	E	L	I	G	E	D	K	I	E	Q	L	V	L	E	E	V	K	G	D	R	K	E	I	L	E	I	D	D	L	I	V	N	Y	G	F	V	S	S	L	G	P	I	K	N	W	G	L	D	I	E	K	N	S	I	V	V	K	S	T	M	E	T	N	I	E	G	F	F	A	A	G
Template Known Secondary structure				T	T									S	S	S									T	T	S	S								S													G	G	G	G	G	S						T	T						T	T	S	B		S	S	T	T					G
Template Predicted Secondary structure
Template SS confidence
	205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

	649	650	.	.			.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence	G	C	D	V	.	.	A	M	E	L	D	A	R	R	A	I	A	Q	G	T	R	L	A	L	E	I
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence	D	I	C	T	Y	E	G	K	V	N	L	I	A	S	G	F	G	E	A	P	T	A	V	N	N	A
Template Known Secondary structure	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
	285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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