Job Description P42593 Confidence 99.86% Date Thu Jan 5 12:01:40 GMT 2012 Rank 103 Aligned Residues 251 % Identity 22% Template c3f8rD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:thioredoxin reductase (trxb-3); PDBTitle: crystal structure of sulfolobus solfataricus thioredoxin2 reductase b3 in complex with two nadp molecules Resolution 1.95 Å

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		375	.			.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.						.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																																																		.	.	.	.	.
Query SS confidence				.	.																																																		.	.	.	.	.
Query Sequence		K	N	.	.	L	A	V	V	G	A	G	P	A	G	L	A	F	A	I	N	A	A	A	R	G	H	Q	V	T	L	F	D	A	H	S	E	I	G	G	Q	F	N	I	A	K	Q	I	P	G	K	E	E	F	.	.	.	.	.	Y	E	T	L	R	Y	Y	R	R	M	I	E	V	T	G	V	T	L	K	L	N	H
Query Conservation				.	.																																																		.	.	.	.	.
Alig confidence				.	.																															.	.																		.	.	.	.	.
Template Conservation																																				.	.
Template Sequence		E	K	F	D	V	I	I	V	G	L	G	P	A	A	Y	G	A	A	L	Y	S	A	R	Y	M	L	K	T	L	V	I	G	E	T	.	.	P	G	G	Q	L	T	E	A	G	I	V	D	D	Y	L	G	L	I	E	I	Q	A	S	D	M	I	K	V	F	N	K	H	I	E	K	Y	E	V	P	V	L	L	D	I
Template Known Secondary structure												S													T	T								S	S	.	.	T	T	G	G	G	G	G							S	T	T	S	T	T																T	T	T						S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		448	.														450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.			.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query Sequence		T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	D	Q	L	Q	A	F	D	E	T	I	L	A	S	G	I	V	P	R	T	P	P	I	D	G	I	D	.	.	H	P	K	V	L	S	Y	L	D	V	L	R	D	K	A	P	V	G	N	K	V	A	I	I	G	C	G	G	I	G	F	D	T	A	M
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		V	E	K	I	E	N	R	G	D	E	F	V	V	K	T	K	R	K	G	E	F	K	A	D	S	V	I	L	G	I	G	V	K	R	R	K	L	G	V	P	G	E	Q	E	F	A	G	R	G	I	S	Y	C	S	V	C	D	A	P	L	F	K	N	R	V	V	A	V	I	G	G	G	D	S	A	L	E	G	A	E
Template Known Secondary structure									S	S	S						S	S	S																						T	T	T	T	T	T	B	T	T	T			S						G	G	G	G	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	S	Q	P	G	E	S	T	S	Q	N	I	A	G	F	C	N	E	W	G	I	D	S	S	L	Q	Q	A	G	G	L	S	P	Q	G	M	Q	I	P	R	S	P	R	Q	I	V	M	L	Q	R	K	A	S	K	P	G	Q	G	L	G	K	T	T	G	W	I	H	R	T	T	L	L	S	R	G	V	K	M	I
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	S	S	Y	S	T	K	V	Y	L	I	H	R	R	D	T	F	K	A	Q	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	E	T	V	K	K	K	P	N	V	E	F	V
Template Known Secondary structure				T	T	T		S							S	S	S	S			S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T		T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.																																												.	.	.	.	.	200	.	.	.	.	.	.	.	.
		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.																	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.			.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		P	G	V	S	Y	Q	K	I	D	D	D	G	L	H	V	V	I	N	G	E	T	Q	V	L	A	V	D	N	V	V	I	C	A	G	Q	E	P	N	R	A	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	L	I	D	S	G	K	T	V	H	L	I	G	G	C	D	V	.	.	A	M
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence																			.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																			.	.
Template Sequence		L	N	S	V	V	K	E	I	K	G	D	K	V	V	K	Q	V	.	.	V	V	E	N	L	K	V	N	G	V	F	I	E	I	G	F	D	P	P	T	D	F	A	K	S	N	G	I	E	T	D	T	N	G	Y	I	K	V	D	E	W	M	R	T	S	V	P	G	V	F	A	A	G	D	C	T	S	A	W	L	G
Template Known Secondary structure			S									S	S	S					.	.																										T	T			B		T	T	S	S	B				T	T		B		S	S	T	T					S	T	T	B	S	T	T	T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		655	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	D	A	R	R	A	I	A	Q	G	T	R	L	A	L	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	Q	V	I	T	A	V	A	Q	G	A	V	A	A	T	S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions