Job Description P42593 Confidence 98.26% Date Thu Jan 5 12:01:40 GMT 2012 Rank 429 Aligned Residues 152 % Identity 17% Template c2vdcF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:glutamate synthase [nadph] large chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications. Resolution 9.50 Å

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	G	N	D	F	I	I	I	Y	R	L	S	M	L	D	L	V	E	D	G	G	T	F	A	E	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	I	N	T	G	I	.
Query Conservation																																																																																	.
Alig confidence										.	.				.	.					.	.	.	.												.																	.	.	.	.	.	.	.	.	.																				.
Template Conservation										.	.				.	.					.	.	.	.												.																	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	S	P	P	P	H	H	.	.	D	I	Y	.	.	S	I	E	D	.	.	.	.	L	A	Q	L	I	Y	D	L	K	Q	I	.	N	P	D	A	K	V	T	V	K	L	V	S	R	S	G	I	.	.	.	.	.	.	.	.	.	G	T	I	A	A	G	V	A	K	A	N	A	D	I	I	L	I	S	G	N
Template Known Secondary structure						S	S		T	.	.	T		S	.	.	S				.	.	.	.												.		T	T											T	T		.	.	.	.	.	.	.	.	.										T	T		S							T
Template Predicted Secondary structure										.	.				.	.					.	.	.	.												.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		965	.	.	.	.	970	.	.			.	.	.			.	.	.	.					980	.	.	.	.	.	.	.	.	.	990		.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.										.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.
			251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280							.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure		.																															.	.	.	.	.	.
Query SS confidence		.																															.	.	.	.	.	.
Query Sequence		.	G	W	H	E	A	R	I	P	T	I	A	T	P	V	P	R	G	A	F	S	W	V	T	R	K	L	K	G	H	V	.	.	.	.	.	.	S	L	P	L	V	T	T	N	R	I	N	D	P	Q	V	A	D	D	I	L	S	R	G	D	A	D	M	V	S	M	A	R	P	F	L	A	D	A	E	L	L	S	K
Query Conservation		.																															.	.	.	.	.	.
Alig confidence		.																															.	.	.	.	.	.																								.												.	.	.	.	.	.	.	.
Template Conservation																																																														.												.	.	.	.	.	.	.	.
Template Sequence		S	G	G	T	G	A	S	P	Q	T	S	I	K	F	A	G	L	P	W	E	M	G	L	S	E	V	H	Q	V	L	T	L	N	R	L	R	H	R	V	R	L	R	T	D	G	G	L	K	T	G	R	D	I	V	I	A	A	M	L	G	.	A	E	E	F	G	I	G	T	A	S	L	.	.	.	.	.	.	.	.
Template Known Secondary structure		T				S	S									S																		T	T		T	T	T	S						S	S			S										T	T	.		S										.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.												.	.	.	.	.	.	.	.
Template SS confidence
		1027	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.		.	.	.	1090	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	S	G	R	A	D	E	I	N	T	C	I	G	C	N	Q	A	C	L	D	Q	I	F	V	G	K	V	T	S	C	L	V	N	P	R	A
Query Conservation
Alig confidence						.	.	.	.	.	.	.																	.	.	.
Template Conservation						.	.	.	.	.	.	.																	.	.	.
Template Sequence		I	A	M	G	.	.	.	.	.	.	.	C	I	M	V	R	Q	C	H	S	N	T	C	P	V	G	V	.	.	.	C	V	Q	D	D	K	L
Template Known Secondary structure				T	T	.	.	.	.	.	.	.							G	G	G	T			T	T	S	S	.	.	.	S
Template Predicted Secondary structure						.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		1098	.	1100	.								.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.				.	.	1120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions