Return to main results Retrieve Phyre Job Id

Job DescriptionP42593
Confidence98.17%DateThu Jan 5 12:01:40 GMT 2012
Rank451Aligned Residues120
% Identity16%Templatec2rdxG_
PDB info PDB header:structural genomics, unknown functionChain: G: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, putative; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from roseovarius nubinhibens ism
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   142.......150.........160.........170.........180.........190.........200.........210.........220.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  DNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDL
Query Conservation    
  

  
  








  



   
 
   
 
 
 



 


 
   

   

   
    
  
      
Alig confidence 
























.........................



























..
Template Conservation               

   




 
.........................   
   
  

   
    
 



  ..
Template Sequence  AETRAELARHRAAGYRQFQIKVGAD. . . . . . . . . . . . . . . . . . . . . . . . . WQSDIDRIRACLPLLEPGEKAMADANQG. .
Template Known Secondary structure  TT



S
.........................GGGS
TT

SS
..
Template Predicted Secondary structure 







.........................








..
Template SS confidence 















































































   145....150.........160......... 170.........180.........190.......
 
   222.......230.........240.........250.........260.........270.........280.........290.........300.
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  VEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILS
Query Conservation     
    
       
   
 
   

 
                        

     

   
           
 
Alig confidence  ....

















.


................


.

































Template Conservation  ....     
      
     . 

................

 .   
    
      


 

           
 
Template Sequence  . . . . WRVDNAIRLARATRDLDY. ILE. . . . . . . . . . . . . . . . QPC. RSYEECQQVRRVADQPMKLDECVTGLHMAQRIVA
Template Known Secondary structure  ....S
TTT


.................

S.SSTT

S

TT

S
Template Predicted Secondary structure  ....



.................


.











Template SS confidence 















































































   198.200.........210..... ... .220. ........230.........240.........250.....
 
   302.......310
Predicted Secondary structure 




Query SS confidence 








Query Sequence  RGDADMVSM
Query Conservation   
  
 
  
Alig confidence 








Template Conservation      
    
Template Sequence  DRGAEICCL
Template Known Secondary structure  T

S
Template Predicted Secondary structure 



Template SS confidence 








   256...260....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions