Return to main results Retrieve Phyre Job Id

Job DescriptionP42593
Confidence98.33%DateThu Jan 5 12:01:40 GMT 2012
Rank419Aligned Residues124
% Identity27%Templatec2p88E_
PDB info PDB header:lyaseChain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme PDBTitle: crystal structure of n-succinyl arg/lys racemase from2 bacillus cereus atcc 14579
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160.........170.........180.........190.........200.........210.........220
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  IDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLD
Query Conservation     
  

  
  








  



   
 
   
 
 
 



 


 
   

   

   
    
  
     
Alig confidence 

























.........................


























..
Template Conservation         
      
    


 
  .........................   
   
  

   
    
 



 ..
Template Sequence  PENMAEEAASMIQKGYQSFKMKVGTN. . . . . . . . . . . . . . . . . . . . . . . . . VKEDVKRIEAVRERVGNDIAIRVDVNQ. .
Template Known Secondary structure  TTT



S
.........................TTTSS
TT..
Template Predicted Secondary structure 







.........................







..
Template SS confidence 















































































   142.......150.........160....... ..170.........180.........190....
 
   221..... ...230.........240.........250.........260.........270.........280.........290.........
Predicted Secondary structure 





.
































Query SS confidence 





.








































































Query Sequence  LVEDGG. TFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDI
Query Conservation      
 .   
       
   
 
   

 
                        

     

   
           
Alig confidence  ....

.




















..............










.

























Template Conservation  ....       
      
    
  

..............

    
    .  
     



 

           
Template Sequence  . . . . GWKNSANTLTALRSLGHLNIDWIE. . . . . . . . . . . . . . QPVIADDIDAM. AHIRSKTDLPLMIDEGLKSSREMRQI
Template Known Secondary structure  ....TTBSTSTTTT
S
..............

B
TT
.T

S
STT

S
Template Predicted Secondary structure  ....






..............






.








Template SS confidence 















































































   195....200.........210........ .220......... 230.........240.........250.....
 
   300.........310
Predicted Secondary structure 




Query SS confidence 










Query Sequence  LSRGDADMVSM
Query Conservation 
  
  
 
  
Alig confidence 










Template Conservation 
     
 
  
Template Sequence  IKLEAADKVNI
Template Known Secondary structure  T

S
Template Predicted Secondary structure 





Template SS confidence 










   256...260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions