Job Description P42593 Confidence 98.88% Date Thu Jan 5 12:01:40 GMT 2012 Rank 307 Aligned Residues 147 % Identity 12% Template c2oo6A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative l-alanine-dl-glutamate epimerase; PDBTitle: crystal structure of putative l-alanine-dl-glutamate epimerase from2 burkholderia xenovorans strain lb400 Resolution 1.80 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		I	D	N	F	A	R	C	A	Q	L	A	R	E	A	G	Y	D	G	V	E	V	M	G	S	E	.	G	Y	L	I	N	E	F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	G	N	D	F	I	I	I	Y	R	L	S	M	L
Query Conservation																											.
Alig confidence																											.																																																						.
Template Conservation																																																																																	.
Template Sequence		L	D	G	V	K	R	T	A	E	E	A	R	E	R	Q	F	R	A	I	K	T	N	I	F	I	H	D	D	G	P	L	H	A	W	R	P	G	F	A	V	P	F	Q	P	A	L	N	V	D	R	K	V	L	R	N	L	R	A	H	L	E	A	L	R	D	G	A	G	P	D	V	E	I	L	L	D	L	N	F	.
Template Known Secondary structure															T	T												S	S	S	S					B	G	G	G	T	B	S			T	T																								S	S	S							T	T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	V	E	D	G	G	T	F	A	E	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	I	N	T	G	I	G	W	H	E	A	R	I	P	T	I	A	T	P	V	P	R	G	A	F	S	W	V	T	R	K	L	K	G	H	V	S	L	P	L	V	T	T	N	R	I	N	D	P	Q	V	A	D	D	I
Query Conservation
Alig confidence		.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation		.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Sequence		.	.	.	.	.	N	A	K	P	E	G	Y	L	K	I	L	R	E	L	A	D	F	D	L	F	W	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	S	.	Y	S	P	Q	G	L	A	Y	V	R	N	H	S	P	H	P	I	S	S	C	E	T	L	F	G	I	R	E	F	K	P	F
Template Known Secondary structure		.	.	.	.	.		S												T	T	T	S			S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	S											T		S	S						T	T
Template Predicted Secondary structure		.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template SS confidence
							221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.																	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	R	G	D	A	D	M	V	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	A	N	A	V	D	V	A	I	V
Template Known Secondary structure				T	T			S
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions