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Job DescriptionP42593
Confidence99.95%DateThu Jan 5 12:01:40 GMT 2012
Rank49Aligned Residues257
% Identity23%Templatec2gr2A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:ferredoxin reductase; PDBTitle: crystal structure of ferredoxin reductase, bpha4 (oxidized form)
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   374.....380.........390......... 400.........410.........420.........430.........440.........450.
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Query Sequence  KKNLAVVGAGPAGLAFAINAAARGHQ. . VTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA
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Template Sequence  KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDR. . PPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQS
Template Known Secondary structure 
SS

ST

S
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B
S..GGGGT

GGGSB


TTS
S
T

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   7..10.........20.........30.........40........ .50.........60.........70.........80....
 
   452.... ...460.........470.........480.. .......490.........500.........510....
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Query Sequence  DQLQA. . . . . . . . . . . . FDETILASGIVPRTPPIDGIDHPKVL. . . . . SYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYL
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Template Sequence  FDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATA
Template Known Secondary structure  TTTTTTS

S





GGGTT
SS


SSTT

TT


S
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   515....520.........530.........540.........550.........560.........570.........580.........590....
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Query Sequence  SQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPG
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Template Sequence  RTAGVHVSLV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ETQPRLMSRAAPATLADFVARYHAAQGVDLRFE
Template Known Secondary structure  TT
.....................................SSSSS
TTTS
TT
T
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   165....170.... .....180.........190.........200.......
 
   595....600.........610.........620.........630.... .....640.........650...
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Query Sequence  VSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALA. . . . . . . . . . . . . . QPLIDSGKTVHLIGGCDVA. . . . . . .
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Template Sequence  RSVTGSVDGVVLL. . . DDGTRIAADMVVVGIGVLANDALARAAGLACDDGIFVDAYGRTTCPDVYALGDVTRQRNPLSGR
Template Known Secondary structure 

TT...TTS

S
S


T

BSSS

TT
B
SSTT
GGGTTTT
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   208.210.........220 .........230.........240.........250.........260.........270.........280....
 
   654.....660.........670..
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Query Sequence  . . MELDARRAIAQGTRLALEI
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Template Sequence  FERIETWSNAQNQGIAVARHL
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   285....290.........300.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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