Job Description P42593 Confidence 99.13% Date Thu Jan 5 12:01:40 GMT 2012 Rank 250 Aligned Residues 226 % Identity 19% Template c2gjlA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical protein pa1024; PDBTitle: crystal structure of 2-nitropropane dioxygenase Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	N	R	V	L	M	G	S	M	H	T	G	L	E	E	Y	P	D	G	A	E	R	L	A	A	F	Y	A	E	R	A	R	H	G	V	A	L	I	V	S	G	G	I	A	P	D	L	T	G	V	G	M	E	G	G	A	M	L	N	D	A	S	Q	I	P	H	H	R	T	I	T	E	A	V	H	Q	E	G	G
Query Conservation
Alig confidence													.	.	.	.	.	.	.															.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.															.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	H	P	I	M	Q	G	G	M	Q	.	.	.	.	.	.	.	W	V	G	R	A	E	M	A	A	A	V	A	N	A	.	G	G	L	A	T	L	S	A	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	S	P	E	A	L	A	A	E	I	A	R	C	R	E	L	T	D	R	P	F
Template Known Secondary structure			S	S	S							T	.	.	.	.	.	.	.	T	T		S										T	.	T	S	B					T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S																S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.															.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.								.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.																.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	A	L	Q	I	L	H	T	G	R	Y	S	Y	Q	P	H	L	V	A	P	S	A	L	Q	A	P	I	N	R	F	V	P	H	E	L	S	H	E	E	I	L	Q	L	I	D	N	F	A	R	C	A	Q	L	A	R	E	A	G	Y	D	G	V	E	V	M	G	S	E	G	Y	L	I	N	E	F	L	T	L	R
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.			.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.			.
Template Sequence		G	V	N	L	T	L	L	P	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	V	P	Y	A	E	Y	R	A	A	I	I	E	A	G	I	R	V	V	E	T	A	G	N	.	.	.	.	.	.	.	.	.	D	P	.
Template Known Secondary structure											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S														T	T									S	.	.	.	.	.	.	.	.	.			.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.			.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80																																		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.										.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	Q	R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	G	N	D	F	I	I	I	Y	R	L	S	M	L	D	L	V	E	D	G	G	T	F	A	E	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	I	N	T	G	I	G	W	H	E	A	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	H	I	A	E	F	R	R	H	.	.	.	G	V	K	V	I	H	K	C	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	H	A	L	K	A	E	R	L	G	V	D	A	V	S	I	D	G	F	E	C	A	G	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	.	.	.	T								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T		S							T	T		S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					108	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.														.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.							.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		I	P	T	I	A	T	P	V	P	R	G	A	F	S	W	V	T	R	K	L	K	G	H	V	S	L	P	L	V	T	T	N	R	I	N	D	P	Q	V	A	D	D	I	L	S	R	G	D	A	D	M	V	S	M	A	R	P	F	L	A	.	.	.	.	.	.	D	A	E	L	L	S	K	A	Q	S	G	R	A	D
Query Conservation																																																														.	.	.	.	.	.
Alig confidence									.	.	.	.	.																																				.													.	.	.	.	.	.
Template Conservation									.	.	.	.	.																																				.
Template Sequence		P	G	E	D	D	I	P	.	.	.	.	.	G	L	V	L	L	P	A	A	A	N	R	L	R	V	P	I	I	A	S	G	G	F	A	D	G	R	G	L	V	A	A	L	A	L	G	.	A	D	A	I	N	M	G	T	R	F	L	A	T	R	E	C	P	I	H	P	A	V	K	A	A	I	R	A	A	D	E	R
Template Known Secondary structure				S	S				.	.	.	.	.										T	T			S						S	S			S											T	.		S					S					T	S	S	S	S		S													T	T
Template Predicted Secondary structure									.	.	.	.	.																																				.
Template SS confidence
		153	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	N	T	C	I	G	C	N	Q	A	C	L	D	Q	I	F	V	G	K	V	T	S	C	L	V	N	P
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.
Template Sequence		S	T	.	.	.	.	.	.	.	.	.	D	L	I	M	R	S	L	R	N	T	A	R	V	A	R	N	A
Template Known Secondary structure				.	.	.	.	.	.	.	.	.					G	G	G	T								S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.										.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions