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Job DescriptionP42593
Confidence100.00%DateThu Jan 5 12:01:40 GMT 2012
Rank1Aligned Residues671
% Identity100%Templatec1ps9A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:2,4-dienoyl-coa reductase; PDBTitle: the crystal structure and reaction mechanism of e. coli 2,4-2 dienoyl coa reductase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQI
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Template Conservation      

 
  
    
 

    
                     

 

 



     
                   
Template Sequence  SYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQI
Template Known Secondary structure 

TTTT


SS
SSS




S
TTSTTTT
SBSSSTT
SBTT

B

SGGG
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  PHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEV
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Template Conservation            
  
     

 
 
           
              
  

      
  

  
  

 




Template Sequence  PHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEV
Template Known Secondary structure  TT




GGGSBSTT
SSS


TT
SS



TT
S
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  MGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAA
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Template Conservation 
   
 
   


   
 
 
 



 


 
   


  

   
 
  
  
         
    
           
Template Sequence  MGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAA
Template Known Secondary structure 
BTS
TTT



STTSSS
SSS

STT


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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  GATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELL
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Template Conservation 
 
   

 
                        

     

   
           
  
  
 
   
   


   
Template Sequence  GATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELL
Template Known Secondary structure  T
S
BTT
SS
SSSTTS
TTTTTTS
SS

SS

STTS
SST
TT
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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
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Query Sequence  SKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVT
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Template Conservation   
   
    
  
  
   
           
  

    
      

   








 





  

  
  

Template Sequence  SKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVT
Template Known Secondary structure  TT
GGG







TTTTT




SS
TTTT
TTTS


S
SS



STTT
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   321........330.........340.........350.........360.........370.........380.........390.........400
 
   402.......410.........420.........430.........440.........450.........460.........470.........480.
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Query Sequence  LFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTADQLQAFDETILASGIVPRTPPIDGIDHPKV
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Template Sequence  LFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTADQLQAFDETILASGIVPRTPPIDGIDHPKV
Template Known Secondary structure  SSSSS
TTTTSTT
TTT
S



SSSS

SS







BTTTSTT
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   401........410.........420.........430.........440.........450.........460.........470.........480
 
   482.......490.........500.........510.........520.........530.........540.........550.........560.
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Query Sequence  LSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVML
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Template Conservation        
         
  

 
    
 
  
   
  
                                        
Template Sequence  LSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVML
Template Known Secondary structure  TS




S

T

SS
GGG
TTB
TT

SGGGB
TT






SS
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   481........490.........500.........510.........520.........530.........540.........550.........560
 
   562.......570.........580.........590.........600.........610.........620.........630.........640.
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Query Sequence  QRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQPLIDSG
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Template Conservation                    
   
   

 
     
  
   

     
    
 

 



 
  
   
   
    
Template Sequence  QRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQPLIDSG
Template Known Secondary structure 
SS
S
TTTTS
TTTTT

S
TTTT

S




TTTTT
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   561........570.........580.........590.........600.........610.........620.........630.........640
 
   642.......650.........660.........670..
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Query Sequence  KTVHLIGGCDVAMELDARRAIAQGTRLALEI
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Template Conservation    
  



          

  
   
  
Template Sequence  KTVHLIGGCDVAMELDARRAIAQGTRLALEI
Template Known Secondary structure 


GGGT

SS


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   641........650.........660.........670.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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