Phyre 2 alignment of P42593 with c1lqtB

Job Description P42593
Confidence 99.95% Date Thu Jan 5 12:01:40 GMT 2012

Rank 51 Aligned Residues 299

% Identity 17% Template c1lqtB_

PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:fpra; PDBTitle: a covalent modification of nadp+ revealed by the atomic resolution2 structure of fpra, a mycobacterium tuberculosis oxidoreductase

Resolution 1.05 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.								.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence	Q	K	K	N	L	A	V	V	G	A	G	P	A	G	L	A	F	A	I	N	A	A	A	R	.	.	.	.	.	.	.	G	H	Q	V	T	L	F	D	A	H	S	E	I	G	G	Q	F	N	I	A	K	Q	I	P	G	K	E	E	F	Y	E	T	L	R	Y	Y	R	R	M	I	E	V	T	G	V	T	L	K	L
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.																.
Template Conservation																																															.
Template Sequence	R	P	Y	Y	I	A	I	V	G	S	G	P	S	A	F	F	A	A	A	S	L	L	K	A	A	D	T	T	E	D	L	D	M	A	V	D	M	L	E	M	L	P	T	P	W	G	.	L	V	R	S	G	V	A	P	D	H	P	K	I	K	S	I	S	K	Q	F	E	K	T	A	E	D	P	R	F	R	F	F	G
Template Known Secondary structure											S																	S	T	T										S	S	S	S		S	T	.					T	S		T	T		T	T	G	G	G	G									T	S	T	T
Template Predicted Secondary structure																																															.
Template SS confidence
	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

	446	.	.	.	450	.						.	.	.	.	.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.												.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.																.																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.																.																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence	N	H	T	V	T	A	.	.	.	.	.	D	Q	L	Q	A	F	D	E	T	I	L	A	S	G	I	.	V	P	R	T	P	P	I	D	G	I	D	H	P	K	V	L	S	Y	L	D	V	L	R	D	K	A	P	.	.	.	.	.	.	.	.	.	.	.	V	G	N	K	V	A	I	I	G	C	G	G	I	G	F
Query Conservation							.	.	.	.	.																.																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.																.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	N	V	V	V	G	E	H	V	Q	P	G	E	L	S	E	R	Y	D	A	V	I	Y	A	V	G	A	Q	S	D	R	M	L	N	I	P	G	E	D	L	P	G	S	I	A	A	V	D	F	V	G	W	Y	N	A	H	P	H	F	E	Q	V	S	P	D	L	S	G	A	R	A	V	V	I	G	N	G	N	V	A	L
Template Known Secondary structure	S			B	T	T	T	B									S	S																	T	T	T	T	S	T	T												T	T		G	G	G	T	T							S	S							S	S
Template Predicted Secondary structure
Template SS confidence
	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

	509	510	.	.	.	.	.	.	.	.																					.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	D	T	A	M	Y	L	S	Q	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	T	S	Q	N	I	A	G	F	C	N	E	W	G	I	D	S	S	L	Q	Q	A	G	G	L	S	P	Q	G	M	Q	I	P	R	S	P	R	Q	I	V	M	L	Q	R	K	A	S	K	P
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	D	V	A	R	I	L	L	T	D	P	D	V	L	A	R	T	D	I	A	D	H	A	L	E	S	L	R	P	R	G	I	Q	E	V	V	I	V	G	R	R	G	P	L	Q	A	A	F	T	T	L	E	L	R	E	L	A	D	L	D	G	V	D	V	V	I	D	P	A	E	L	D	G	I	T	D	E	D	A	A	A
Template Known Secondary structure								S						T	T	S											T	T											S	S		G	G	G										G	G	G	G		T	T							G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
	161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

	569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.							.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.																				.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	G	Q	G	L	G	K	T	T	G	W	I	H	R	T	T	L	L	S	R	.	.	.	.	.	.	G	V	K	M	I	P	G	V	S	Y	Q	K	I	D	D	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	V	V	I	N	G	E	T	Q	V	L	A	V	D	N	V	V	I
Query Conservation																				.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	V	G	K	V	C	K	Q	N	I	K	V	L	R	G	Y	A	D	R	E	P	R	P	G	H	R	R	M	V	F	R	F	L	T	S	P	I	E	I	K	G	K	R	K	V	E	R	I	V	L	G	R	N	E	L	V	S	D	G	S	G	R	V	A	A	K	D	T	G	E	R	E	E	L	P	A	Q	L	V	V	R
Template Known Secondary structure																	T	S				T	T	S								S									S	S	S															S	S	S	S															S
Template Predicted Secondary structure
Template SS confidence
	241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

	624	.	.	.	.	.	630														.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	C	A	G	Q	E	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	L	A	Q	P	L	I	D	S	G	K	T	V	H	L	I	G	G	C	D	V	A	M	E	L	D	A	R	R	A	I	A	Q	G	T	R	L	A	L	E	I
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	S	V	G	Y	R	G	V	P	T	P	G	L	P	F	D	D	Q	S	G	T	I	P	N	V	G	G	R	I	N	G	S	P	N	E	Y	V	V	G	W	I	K	R	G	P	T	G	V	I	G	T	N	K	K	D	A	Q	D	T	V	D	T	L
Template Known Secondary structure		S								T	T	S			B	T	T	T	T	B					T	T			T	T		S	S					T						S		S		T	T
Template Predicted Secondary structure
Template SS confidence
	321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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