Job Description P42593 Confidence 99.27% Date Thu Jan 5 12:01:40 GMT 2012 Rank 214 Aligned Residues 217 % Identity 18% Template c1jrxA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:flavocytochrome c; PDBTitle: crystal structure of arg402ala mutant flavocytochrome c32 from shewanella frigidimarina Resolution 2.00 Å

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		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.														.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	C	I	G	C	N	Q	A	C	L	D	Q	I	F	V	G	K	V	T	S	C	L	V	N	P	R	A	C	H	E	T	K	M	P	I	L	P	A	V	Q	K	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	V	V	G	A	G	P	A	G	L	A	F	A	I	N	A	A	A	R	G	H	Q	V
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.			.									.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.			.									.	.	.
Template Sequence		S	M	V	Y	C	D	S	.	C	H	.	S	F	D	F	N	M	P	Y	.	.	.	A	K	K	W	L	R	D	E	P	T	I	A	E	L	A	K	D	K	S	E	R	Q	A	A	L	A	S	A	P	H	D	T	V	D	V	V	V	V	G	S	G	G	A	G	F	S	A	A	I	S	A	T	D	S	G	A	K	V
Template Known Secondary structure					G	G	G	G	.	T		.							T	T	.	.	.											T	T	G	G	G	G	G										S			S				S							S													T	T
Template Predicted Secondary structure									.			.									.	.	.
Template SS confidence
		78	.	80	.	.	.	.		.	.		.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	F	D	A	H	S	E	I	G	G	Q	F	N	I	A	K	Q	I	P	G	K	E	E	F	Y	E	T	L	R	Y	Y	R	R	M	I	E	V	T	G	V	T	L	K	L	N	H	T	V	T	A	D	Q	L	Q	A	F	D	E	T	I	L	A	S	G	I	V	P	R	T	P	P	I	D	G	I	D	H	P	K
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	I	E	K	E	P	V	I	G	G	N	A	K	L	A	A	G	G	M	N	A	A	W	T	D	Q	Q	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	I	T	D	S	P
Template Known Secondary structure						S	S	S	S	S		T	T	G	G	G			S					S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																																												.	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	S	Y	L	D	V	L	R	D	K	A	P	V	G	N	K	V	A	I	I	G	C	G	G	I	G	F	D	T	A	M	Y	L	S	Q	P	G	E	S	T	S	Q	N	I	A	G	F	C	N	E	W	G	I	D	S	S	L	Q	Q	A	G	G	L	S	P	Q	G	M	Q	I	P	R	S	P	R	Q	I	V	M
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	M	F	E	D	T	M	K	G	G	Q	N	I	N	D	P	A	L	V	K	V	L	S	S	H	S	K	D	S	V	D	W	M	T	A	M	G	A	D	L	T	D	V	G	M	M	G	G	A	S	V	N	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T	T		S																						T	T										T	T		S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.								.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.
Query Sequence		L	Q	R	K	A	S	K	P	G	Q	G	L	G	K	T	T	G	W	I	H	R	T	T	L	L	S	R	G	V	K	M	I	P	G	V	S	Y	Q	K	I	D	D	D	G	.	.	.	.	.	.	.	L	H	V	V	I	N	G	E	T	Q	V	L	A	V	D	N	V	V	I	C	A	G
Query Conservation																																														.	.	.	.	.	.	.
Alig confidence		.	.	.																																										.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	H	R	P	T	G	G	A	G	V	G	A	H	V	V	Q	V	L	Y	D	N	A	V	K	R	N	I	D	L	R	M	N	T	R	G	I	E	V	L	K	D	D	K	G	T	V	K	G	I	L	V	K	G	M	Y	K	G	Y	Y	W	V	K	A	D	A	V	I	L	A	T	G
Template Known Secondary structure		.	.	.			S	T	T	T																		T	T					S	S										T	T	S	S									T	T	T								S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions