Job Description P63235 Confidence 99.18% Date Thu Jan 5 12:08:01 GMT 2012 Rank 4 Aligned Residues 436 % Identity 12% Template c2xq2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: structure of the k294a mutant of vsglt Resolution 2.73 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		K	Q	L	T	L	L	G	F	F	A	I	T	A	S	M	V	M	A	.	.	.	.	V	Y	E	Y	P	T	F	A	T	S	G	F	S	L	V	F	F	L	L	L	G	G	I	L	W	F	I	P	V	G	L	C	A	A	E	M	A	T	V	D	G	W	E	E	G	G	V	F	A	W	V	S	N	T	L	G	P	R
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.																												.																.	.
Template Conservation																																																			.																.	.
Template Sequence		V	S	L	P	W	W	A	V	G	A	S	L	I	A	A	N	I	S	A	E	Q	F	I	G	M	S	G	S	G	Y	S	I	G	L	A	I	A	S	Y	E	W	M	S	A	I	T	L	I	I	.	V	G	K	Y	F	L	P	I	F	I	E	K	G	I	Y	.	.	T	I	P	E	F	V	E	K	R	F	N	K	K
Template Known Secondary structure															G	G	G	S	S														T		G	G	G	G													.				T								T	T			.	.	S									T
Template Predicted Secondary structure																																																			.																.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		W	G	F	A	A	I	S	F	G	Y	L	Q	I	A	I	G	.	F	I	P	M	L	Y	F	V	L	G	A	L	S	Y	I	L	K	W	P	A	L	N	E	D	P	I	T	K	T	I	A	A	L	I	I	L	W	A	L	A	L	T	Q	F	G	G	T	K	Y	T	A	R	I	A	K	V	G	F	F	A	G	I	L
Query Conservation																		.
Alig confidence																		.																				.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		L	K	T	I	L	A	V	F	W	I	S	L	Y	I	F	V	N	L	T	S	V	L	Y	L	G	G	L	A	L	E	T	I	L	G	I	P	.	.	.	.	.	.	.	L	M	Y	S	I	L	G	L	A	L	F	A	L	V	Y	S	I	Y	G	G	V	V	W	T	D	V	I	Q	V	F	F	L	V	L	G	G	F
Template Known Secondary structure																	T																					.	.	.	.	.	.	.																		T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.								.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180														.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	A	F	I	L	I	A	L	A	A	I	Y	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	A	P	V	A	I	E	M	D	S	K	T	F	F	P	D	F	S	K	V	G	T	L	V	V	F	V	A	F	I	L	S	Y	M	G	V	E	A	S	A	T	H	V	N	E	M	S	N	P	G	R
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	T	T	Y	M	A	V	S	F	I	G	G	T	D	G	W	F	A	G	V	S	K	M	V	D	A	A	P	G	H	F	E	M	I	L	D	Q	S	N	P	Q	Y	M	N	L	P	G	I	A	V	L	I	G	G	L	W	V	A	N	L	Y	Y	W	G	F	N	Q	Y	I	I	Q	R	T	L	A	A	K	S	V	S
Template Known Secondary structure													G	G	G														G	G	G	S		S	S			S	S	S	G	G	G	G	T	S		T	T					S	T										T	T	T		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.
Query Sequence		D	Y	P	L	A	M	L	L	L	M	V	A	A	I	C	L	S	S	V	G	G	L	S	I	A	M	V	I	.	.	.	.	.	.	.	P	G	N	E	I	N	L	S	A	G	V	M	Q	T	F	T	V	L	M	S	H	V	A	P	E	I	E	W	T	V	R	V	I	S	A	L	L	L	L	G	V	L	A	E	I
Query Conservation																														.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	Q	K	G	I	V	F	A	A	F	L	A	L	I	V	P	F	L	V	V	L	P	G	I	A	A	Y	V	I	T	S	D	P	Q	L	M	A	S	L	G	N	L	P	S	A	A	N	A	D	K	A	Y	P	W	L	T	Q	F	L	P	V	G	V	K	G	V	V	F	A	A	L	A	A	A	I	V	S	S	L
Template Known Secondary structure														T	T	T						T											T														S	T	B	G	G	G								T	S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	W	I	V	G	P	S	R	G	M	Y	V	T	A	Q	K	N	L	L	P	A	A	F	A	K	M	N	K	N	G	V	P	V	T	L	V	I	S	Q	L	V	I	T	S	I	A	L	I	I	L	T	N	T	G	G	G	N	N	M	S	F	L	I	A	L	A	L	T	V	V	I	Y	L	C	A	Y	F	M	L
Query Conservation
Alig confidence														.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		A	S	M	L	N	S	T	A	T	I	F	T	.	.	.	.	M	D	I	Y	K	E	Y	I	S	P	D	S	G	D	H	K	L	V	N	V	G	R	T	A	A	V	V	A	L	I	I	A	A	L	I	A	P	M	L	G	G	I	G	Q	C	F	Q	Y	I	Q	E	Y	T	G	L	V	S	P	G	I	L	A	V	F
Template Known Secondary structure														.	.	.	.			T					T		S																										G	G	G	G	G	G		B											T	T	T
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.					.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	G	Y	I	V	L	V	L	K	H	P	D	L	K	R	T	F	N	I	P	G	G	K	G	V	K	L	V	V	A	I	V	G	L	L	T	S	I	M	A	F	I	V	S	F	L	P	P	D	N	I	Q	G	D	S	T	D	M	Y	V	E	L	L	V	V	S	F	L	V	V	L	A	L	P	F	I	L	Y	A
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Sequence		L	L	G	L	F	W	K	K	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	A	I	I	G	V	V	A	S	I	P	F	A	L	F	L	K	F	M	P	L	S	M	P	.	.	.	.	.	.	.	F	M	D	Q	M	L	Y	T	L	L	F	T	M	V	V	I	A	F	T	S	L
Template Known Secondary structure								T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				S	S					.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template SS confidence
		443	.	.	.	.	.	.	450	.	.	.																	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.								.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	D	R	K	G	K	A	N	T	G	V	T	L	E	P	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	S	I	N	D	D	D	P	K	G	I	S	V	T	S	S	M
Template Known Secondary structure					S	S	S	S		T	T						S	S	S
Template Predicted Secondary structure
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.