Job Description P0AFH6 Confidence 1.92% Date Thu Jan 5 11:26:17 GMT 2012 Rank 72 Aligned Residues 129 % Identity 12% Template c2w2eA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaporin; PDBTitle: 1.15 angstrom crystal structure of p.pastoris aquaporin,2 aqy1, in a closed conformation at ph 3.5 Resolution 1.15 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		K	K	N	S	E	T	L	E	N	F	S	E	K	L	E	V	E	G	R	S	L	W	Q	D	A	R	R	R	F	M	H	N	R	A	A	.	V	A	S	L	I	V	L	V	L	I	A	L	F	V	I	L	A	P	M	L	S	Q	F	A	Y	D	D	T	D	W	A	M	M	S	S	A	P	D	M	E	S	G	H	Y
Query Conservation																																					.
Alig confidence																																					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	P	E	D	A	P	Y	I	T	N	A	Y	K	P	A	Y	A	R	W	G	F	G	S	D	S	V	R	N	H	F	I	A	M	S	G	E	F	V	G	T	F	L	F	L	W	S	A	F	V	I	A	Q	I	A	N	Q	A	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G	T					S					G	G	G	G			T	T	T	T	S																														T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.
Query Sequence		F	G	T	D	S	S	G	R	D	L	L	V	R	V	A	I	G	G	R	I	S	L	M	V	G	V	A	A	A	L	V	A	V	V	V	G	.	.	.	.	.	.	T	L	Y	G	S	L	S	G	Y	L	G	G	K	V	D	S	V	M	M	R	L	L	E	I	L	N	S	F	P	F	M	F	F	V	I	L	L
Query Conservation																																						.	.	.	.	.	.
Alig confidence		.	.																																			.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	T	P	D	G	G	S	N	P	A	Q	L	I	M	I	S	F	G	F	G	F	G	V	M	V	G	V	F	I	T	Y	R	V	S	G	G	N	L	N	P	A	V	T	L	A	L	V	L	A	R	A	I	P	P	F	R	G	I	L	M	A	F	T	Q	I	V	A	G	M	A	A	A	G	A	A	S	A	M
Template Known Secondary structure		.	.		G	G	G																										T	T	T	T					S										T	T	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions