 |
Job Description | Q47274 | Confidence | 30.55% | Date | Thu Jan 5 12:36:44 GMT 2012 |
Rank | 479 | Aligned Residues | 48 |
% Identity | 10% | Template | d2r5yb1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Homeodomain
|
Resolution | 2.60 |
|
  |   |
61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | K | N | N | S | D | L | H | D | L | L | V | D | Y | Y | V | V | G | M | T | . |
. |
. |
. |
. |
. |
. |
. |
F | M | S | L | A | G | K | H | C | C | S | D | G | Y | I | G | K | R | L | Q | K | A | E | G | I | I | E | G |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |   |
|   |
| . | . | . | . | . | . | . | . |   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |   |
|
|   |   |
|
|   |
|   |
|   |
|   |
|
|
Template Sequence |   |
R | N | F | S | K | Q | A | S | E | I | L | N | E | Y | F | Y | S | H | L | S | N | P | Y | P | S | E | E | A | K | E | E | L | A | R | K | C | G | I | T | V | S | Q | V | S | N | W | F | G | N | K | R | I | R | Y | K | K |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|