Job Description Q47274 Confidence 98.86% Date Thu Jan 5 12:36:44 GMT 2012 Rank 5 Aligned Residues 72 % Identity 13% Template d1s7oa_ SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors YlxM/p13-like Resolution 2.31

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		53	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		I	C	G	C	M	A	R	L	K	K	.	N	N	S	D	L	H	D	L	L	V	D	Y	Y	V	V	G	M	T	F	M	S	L	A	G	K	H	C	C	S	D	G	Y	I	G	K	R	L	Q	K	A	E	G	I	I	E	G	M	L	M	A	L	D	I	R	L	E	M	D	I	V	V	N
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		M	N	A	L	F	E	F	Y	A	A	L	L	T	D	K	Q	M	N	Y	I	E	L	Y	Y	A	D	D	Y	S	L	A	E	I	A	D	E	F	G	V	S	R	Q	A	V	Y	D	N	I	K	R	T	E	K	I	L	E	T	Y	E	M	K	L	H	M	Y	S	D	Y	V	V	R	S	E
Template Known Secondary structure										G	G	G	S														T												T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions